Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1830 ATGATTGTAGCGGGAAACCCTGTGGGTACAAAACTGACAATGAATAATGCCTGTGGAGATCTAGAAAGAGAACTTGCCCTTGAACCGTACATCGGGTTAGAGTTTGAATCAGCAGATGATGCACTTCAATTCTACACTTTATATGCAAAGCAAGCTGGATTTAAGGTTCGGATTGGTCAGTTGTATCGATCTAGAACTGATGGATCAGTTTCTTCCAGAAGATTTGTGTGCTCAAGGGAGGGATATCAGCTCCGTTCAAGAACCGGTTGTCCAGCATTTATAAGAGTACAAAAGCGTGACTCAGGGAAGTGGCTTGTTGATCATTTCAATAAGGGCCACAATCATGAACTTGAACCTGAAGGTGCAGGTGAAAGTTGCCTTCCTAATTTGCAGCAGAAAGATGCTATAGGTATAAAATCTGTTACTGAGTTGTCTCACAGACCAAGAAAAAAAATGCTTCTAGTCAAGGACAAGCATTGTTCCTTGGGCTTAATTAATTTTAAGCGGATGAGGAAAGGAGATGAAGGGTCAACCAGAACTGAGCCATATGTAGGTCAAGAATTCAGTTCATCTAATGAAGCTTACCATTCTTATCAGGCATATGCAGCATCTGTGGGTTTCAGAGTCCGTATAGGTCAATTGTTTCGGTCTAAAAATGATGGATTAATTACCTCCCGACGATTTGTGTGCTCCAAAGAGGGCTTCCAACACCCTTCAAGAGTTGGTTGTGGAGCTTATTTGAGAGTTAAGAGACAACCATCTGGGAAGTGGGTTGTAGATCGTCTTCATAAGGAGCATAAGCATAATCTTGATGCTGAACAGGAGGGTAAGCCAAAAAGTCTGCCTGCTTTAAATATTTTGACAGATGAGGTTGATGCAGGATTGGTAAATGGTGACTTATTTAGGATAGATAACTACAGGCCCTTTGCAAGAGGAGGCAGACAAAATCATATTAAAGAATCATGGAGCGGTCCTCAAGAACTCAGGAATTTGATGCTATGGAGTCTAAGAGAAACCGCATGTAAATATATAGATGCCGGTGCAACGTCTCTTGACAAGTACAAACTTGCCTATGAGATTTTGCAGGAGGGGGGGAGGAAGCTATGTTGGCATCGGTGA 1119 0.4209 MIVAGNPVGTKLTMNNACGDLERELALEPYIGLEFESADDALQFYTLYAKQAGFKVRIGQLYRSRTDGSVSSRRFVCSREGYQLRSRTGCPAFIRVQKRDSGKWLVDHFNKGHNHELEPEGAGESCLPNLQQKDAIGIKSVTELSHRPRKKMLLVKDKHCSLGLINFKRMRKGDEGSTRTEPYVGQEFSSSNEAYHSYQAYAASVGFRVRIGQLFRSKNDGLITSRRFVCSKEGFQHPSRVGCGAYLRVKRQPSGKWVVDRLHKEHKHNLDAEQEGKPKSLPALNILTDEVDAGLVNGDLFRIDNYRPFARGGRQNHIKESWSGPQELRNLMLWSLRETACKYIDAGATSLDKYKLAYEILQEGGRKLCWHR 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1830 372 Pfam FAR1 DNA-binding domain 43 118 IPR004330 -
Lele23g1830 372 Pfam FAR1 DNA-binding domain 198 270 IPR004330 -
Lele23g1830 372 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1830 Lele-ChrLele23 21688795 21691077 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele23g1830 FAR1 1.2e-17 CL0274