Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1828 ATGGAGCGCCGCACAATCTCGCCAGACCCAGTAGTGGAGATGCCGCCGGTAATGAAGGCAAGATTGGAGCGTCGGTTCCTCCTTATCCCGCCGATTCAACCTGTTCTGGCCATTCTTCAAAACAGGAAGGTTCTGCTCTCAGGAATATATTATAACTTACAACTTCATCAAGATCCTGATGGAGGAGCTGAAGGCATGATTGTAGAGGAAAACCCTGTGGGTACAAAACTGGCCATGAATAATATCAGTGGAGAGCAGGAAAGAGAACTTGCCCATGAGCCATACATTGGATTAGAGTTTGAATCAGCAGATGATGCTCTTAAGTTTTACACGTTATATGCAAAGCAAGCTGGATTTAAAGTTCGGATTGGTCAGTTGTATCGATCAAGAACTGATAAATCAGTTTCTTCCAGAAGATTTGTGTGCTCAAAGGAGGGATATCAGCTCAGTTCAAGAACTGGTTGTCCAGCATTTATAAGAGTACAAAAGCGTGATTCAGGGAAGTGGGTTGTTGATCATTTCATTAAGGTCCACAATCATGAACTTGAACCTGAAGGTGAGGGTGGAAGTTGCCTTCCTAATTTGCAGCAGAAAGATGCTACAGGTACAAATTCTGTTAGTGAGGTGTCTCACAGACCAAGGAAAAAAATTCTTCAAGTCAAGGACGAGCATTGTTCCTTTGGCATGTTTAATTTTAAGCGGATGCTGAAAGGAGATGAAGGGCCATCAAGAGCTGAGCCATATGTAGGTCAAGAATTCAGTTCGTCTAATGAAGCTTGCCAATCTTATCAGGCATATGCAGCATCTGTGGGTTTCAGAGTTCGTATTGGTCAATTGTTTCGGTCTAAAGCTCATGGATTAATTACATCCCGACGATTTGTGTGCTCCAAAGAGGGCTTCCAGCACCCCTCAAGAGTTGGTTGTGGAGCTTATTTGAGAGTTAAGAGACAACCATCTGGGAAGTGGGTGGTGGATCGTCTTCAAAAGGAGCATAATCATAATCTTGATCCTGAACAGGAGTGTAGGCCAAAAAGTCTTCCTGCTTTAAATATTTTGACAGATGAGGTTGATGCAGGATTGACAGTTGAGGAATTTGACACCACATGGAATGCCCTAATCAACAAATATGGACTAGAGAGCAATGCTTGGCTGAAGGAGATGAATGAGAAGCGTGCATCTTGGGTTCCATTATATCTGAAAGGGACTTTTTTTGCAGGCATTCACGTGAATGAAAGTGTTGATTCATTCTTTGGCACACTTTTAGATGGTCAAACGCCTGTGATGGAGTTCGTTTCACGGTATGAAAGAGGTCTTGAGAGACGCCGTGAGGAAGAAAGAAAGGAGGATTTTAATACCTCCAATTTTCAACCATATTTGCAAACGAAAGAACCAGCAGAAGATCAATGTAGAAGGGTTTATACACTTGCCATATTCAAGATATTTCAGAAAGAGCTTCTGCAATCCTATAGTTATCTAGGCTTTAAAATTTATGAAGAGGGGGTCCTCAGCAGATATTTGGTGCGTAAATGTGGGAATGATCCTGAGAAGCATGTAGTTACCATTAGTGCATCAAGTATCATTAATCATGGAGCAGCTCTCAGGAACTGA 1608 0.4235 MERRTISPDPVVEMPPVMKARLERRFLLIPPIQPVLAILQNRKVLLSGIYYNLQLHQDPDGGAEGMIVEENPVGTKLAMNNISGEQERELAHEPYIGLEFESADDALKFYTLYAKQAGFKVRIGQLYRSRTDKSVSSRRFVCSKEGYQLSSRTGCPAFIRVQKRDSGKWVVDHFIKVHNHELEPEGEGGSCLPNLQQKDATGTNSVSEVSHRPRKKILQVKDEHCSFGMFNFKRMLKGDEGPSRAEPYVGQEFSSSNEACQSYQAYAASVGFRVRIGQLFRSKAHGLITSRRFVCSKEGFQHPSRVGCGAYLRVKRQPSGKWVVDRLQKEHNHNLDPEQECRPKSLPALNILTDEVDAGLTVEEFDTTWNALINKYGLESNAWLKEMNEKRASWVPLYLKGTFFAGIHVNESVDSFFGTLLDGQTPVMEFVSRYERGLERRREEERKEDFNTSNFQPYLQTKEPAEDQCRRVYTLAIFKIFQKELLQSYSYLGFKIYEEGVLSRYLVRKCGNDPEKHVVTISASSIINHGAALRN 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1828 535 Pfam FAR1 DNA-binding domain 108 183 IPR004330 -
Lele23g1828 535 Pfam FAR1 DNA-binding domain 263 336 IPR004330 -
Lele23g1828 535 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 85 198 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1828 Lele-ChrLele23 21680392 21684068 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele23g1828 FAR1 1e-18 CL0274