Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1805 ATGTCTCACATAACTGTCGAGAGGAACAGTAGAAGACAGATGAATGAACATCTCAAAGTTTTAAGATCACTCACCCCATGTTTCTATATCAAGAGGGGAGACCAAGCATCTATAATAGGGGGTGTTATAGAATTCATCAAGGAGCTACACCAAGTTGTTGAAGCGTTGGAGTCCACGAAAAGGAGGAAGAGTCTAAGCCCTAGCCCTCGCGGTGTTGATAGTCCCTTGGGAATTGCAATTATTAATGGATCTGCTGATTCATTCAAGGAAATCGGGGGAGCAGTTAGCTGCAACTCTTCAGTTGCAGACGTGGAAGTCAAAATCTCGGGCCCCAATGTGCTACTGAAAGTGATCTCTCACAGGATCCCGGGTCAACTCGCCAAGATAATAGCTGTTTTAGAAAGGCTTTCTTTCCAAGTTCTTCATCTCAACATCAGTAGCATGGTCGATATGGTTCTCCACCACTTTGTTGTCAAGATAGGACTGGATTGTCAACTGAGTCTGGAGGAACTAGCAATGGAAGTGCAACGAAGCTTCTGCTCAGAAGCTGTTACCAGTACTGCAACAATCAGCGCTTAA 579 0.4473 MSHITVERNSRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVVEALESTKRRKSLSPSPRGVDSPLGIAIINGSADSFKEIGGAVSCNSSVADVEVKISGPNVLLKVISHRIPGQLAKIIAVLERLSFQVLHLNISSMVDMVLHHFVVKIGLDCQLSLEELAMEVQRSFCSEAVTSTATISA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1805 192 Gene3D - 1 64 IPR036638 GO:0046983
Lele23g1805 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 64 IPR036638 GO:0046983
Lele23g1805 192 SMART finulus 4 55 IPR011598 GO:0046983
Lele23g1805 192 FunFam Transcription factor MUTE 1 66 - -
Lele23g1805 192 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Lele23g1805 192 PANTHER TRANSCRIPTION FACTOR FAMA 1 179 IPR044283 GO:0003700|GO:0010052
Lele23g1805 192 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1805 Lele-ChrLele23 21527840 21529291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1805 1 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 63.819 4.93e-80 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele23g1805 HLH 2.7e-05 No_clan