Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1804 ATGGATGAAGTTAATGAAAACTTGAAGAAACAAATAGCAGCACTTTTGCGGGTTATCTCTGCCGCTAATTACTATAAACAGGATAATGTTCCTTGCCAAATCGAAGAGGGTCTTTTCTTGGGTTCGGTTGGCGCTGCAGCCAACAAGGATGCACTTAAAAACTTCAATGTCACTCATGTTTTAACTGTGGCTAATACTCTGACACCCGCGCATCCTAATGATTTTGTATATAAAACTATAAATGTTGTTGACAGAGAGGACGTAGACATAAAACAATACTTCAACGAGTGCTTTGATTTTATTGATGAAGGCAAAAGACTTGGTGGAGGAACTCTAGTTCATTGCTTTGCTGGAAGATCCAGGAGTGTGACTATAGTGGTTGCATATCTGATGAAGACTCATCGAATGAGTTTATCTCAAGCCCTGGAGCATGTGAAGAGCAGACGACCAACAGCATCTCCCAACCTTGGGTTCATTCGACAGCTGGAGGACTTCGAAAAATCTCTTCAAGTTGCAAATTGA 522 0.41 MDEVNENLKKQIAALLRVISAANYYKQDNVPCQIEEGLFLGSVGAAANKDALKNFNVTHVLTVANTLTPAHPNDFVYKTINVVDREDVDIKQYFNECFDFIDEGKRLGGGTLVHCFAGRSRSVTIVVAYLMKTHRMSLSQALEHVKSRRPTASPNLGFIRQLEDFEKSLQVAN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1804 173 CDD DSP 31 164 - -
Lele23g1804 173 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 28 169 - -
Lele23g1804 173 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 91 150 IPR000387 GO:0016311|GO:0016791
Lele23g1804 173 Gene3D Protein tyrosine phosphatase superfamily 22 173 IPR029021 -
Lele23g1804 173 SMART dsp_5 30 168 IPR020422 GO:0006470|GO:0008138
Lele23g1804 173 ProSiteProfiles Dual specificity protein phosphatase domain profile. 30 171 IPR020422 GO:0006470|GO:0008138
Lele23g1804 173 FunFam Dual specificity phosphatase 12 32 173 - -
Lele23g1804 173 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 29 170 IPR029021 -
Lele23g1804 173 Pfam Dual specificity phosphatase, catalytic domain 38 167 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1804 Lele-ChrLele23 21523449 21525488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1804 33 170 Protein tyrosine phosphatase (PTP) family AT3G06110 62.319 7.34e-61 184