Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1798 ATGAAGAAAAGCATGATCCAGAAACAACCATCTCCTGAGAATTTGAACGATGCATCAAGCAGCAGCAGCACTGGCCTCTCCTCAGATGACAAGGACATTGACTGCACCAATGCAATCTCTAATCAGCAATATATTTTGGTGAAGAACTCTGCTTTTCATACCTCGCCCATCAGACTTGACCTGAATTATGCTCGCATGGCCATGGCAGAGATGATGGGTACTTTCATTCTGATGTTCTGTGTGTGTGGAATCATTGCAAGCACGCAGTTGCAGAATGGGCAAGTGGGCCTTCTGGAGTATGCAGCTACAGCAGGATTAACAGTGGTTGTGGTGATCTTCTCAATAGGGCCAATCTCTTGTGCTCATGTTAACCCAGCAGCCACAATAGCTTTTGCAGCATTTGGTCAATTTCCATGGCTGAAGGTTCCAGTTTACATAGTAGCACAGACAGTGGGTTCTGTGTTGGCAACATATATTGGTGGCCTTGTCTATGGGATTAAATCAGATGGCATGATGACAAGGCCAATCCAAGGGTCTGTCTCAGCTTTCTGGGTGGAGCTTATTGCAACTTTCATCATAATGTTCCTTGCTGCTGCCTTGACAAGTGAACTTCAATCAGTGGGTCATTTATCAGGTTTTGTTGTTGGAATAGCTATTGGACTTGCAGTGTTAATCACCGGGCCTGTTTCAGGGGGGTCAATGAATCCTGCAAGATCATTAGGCCCAGCAATTGTGGCATGGAAATTCAAGGACATATGGATATACATCACGGCCCCCATAAGTGGAGCTGTGGCAGGTGTTCTGTTGTTTCGTTTTCTGCGTCTCAAACACCAACCAAGCTCTACTTTTTCTCCTCTCCCACCACAACTCACGACCGCCGTTGCATAA 888 0.4595 MKKSMIQKQPSPENLNDASSSSSTGLSSDDKDIDCTNAISNQQYILVKNSAFHTSPIRLDLNYARMAMAEMMGTFILMFCVCGIIASTQLQNGQVGLLEYAATAGLTVVVVIFSIGPISCAHVNPAATIAFAAFGQFPWLKVPVYIVAQTVGSVLATYIGGLVYGIKSDGMMTRPIQGSVSAFWVELIATFIIMFLAAALTSELQSVGHLSGFVVGIAIGLAVLITGPVSGGSMNPARSLGPAIVAWKFKDIWIYITAPISGAVAGVLLFRFLRLKHQPSSTFSPLPPQLTTAVA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1798 295 MobiDBLite consensus disorder prediction 1 29 - -
Lele23g1798 295 Gene3D Glycerol uptake facilitator protein. 22 282 IPR023271 -
Lele23g1798 295 SUPERFAMILY Aquaporin-like 60 280 IPR023271 -
Lele23g1798 295 Pfam Major intrinsic protein 63 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele23g1798 295 PRINTS Major intrinsic protein family signature 104 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele23g1798 295 PRINTS Major intrinsic protein family signature 253 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele23g1798 295 PRINTS Major intrinsic protein family signature 65 84 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele23g1798 295 PRINTS Major intrinsic protein family signature 216 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele23g1798 295 PRINTS Major intrinsic protein family signature 185 203 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele23g1798 295 PRINTS Major intrinsic protein family signature 141 160 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele23g1798 295 PANTHER AQUAPORIN NIP2-1 42 278 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1798 Lele-ChrLele23 21502671 21504126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1798 68 279 Major Intrinsic Protein MIP AT5G37820 41.784 1.05e-53 176