LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele23g1789	ATGCAAGAATTTCTGGGTTCTGTTCGCCGATCCTTGGTTTTCAGGAGCCCAGGCGGGGACGATGGAGGGTTTGGTGTTGGCGGTCTGGTTGATAAGATTGGCTCCAGCATTCGCAAATCACGAATTGGTCTCTTCACTCAGCCACGCGTCAGGGCTCTGCCTCCGGTTCCCAAGGACAATACTCCTTCGATCCGGTGGCGGAAGGGCGAGTTGATTGGTTGTGGTGCCTTTGGTCGAGTCTACATGGGCATGAACCTTGATTCCGGGGAGCTTATTGCTGTGAAGCAGGTTTTAATTGCCGCAAGGAGTGCTTCGAAAGAGAAAACACAGGCCCATATTTTGGAACTTGAAGAAGAAGTGAAGCTTCTCAAGAATCTCAAACATCCAAATATTGTTAGATACTTGGGAACTGCTAGGGAGGAGGATTCCTTGAATATTCTCCTGGAATTTGTACCTGGAGGATCTATCTCATCACTCTTGGGGAAATTTGGATCATTCCCTGAGTCTGTAATAAAAATGTATACAAAACAACTATTACTGGGTCTTGAGTACCTTCACAAGAATGGAATTATTCACAGAGATATTAAGGGTGCAAACATTCTTGTTGATAATAAAGGATGCATTAAACTAGCAGACTTTGGTGCATCTAAGAAAGTTGTTGAGCTGGCTACCATGAACGGTGCAAAATCAATGAAGGGTACTCCATATTGGATGGCCCCTGAAGTTATTCTGCAGACAGGGCATAGCTTCTCTGCTGATATTTGGAGTGTTGGATGCACCGTGATAGAGATGGCAACAGGGAAGCCTCCATGGAGTGAACAGTTTCAAGAGGTTGCGGCTCTTTTCCATATTGGGACAACTAAATCCCATCCACCCATACCTGACCATCTCTCTGTTGAGGCAAAGGATTTTTTGTTAAAATGCTTGCAGAAGGAACCGGATCTAAGGCCTTCTGCATCAGATTTGTTACAGCATCCATTTATAACCTGCGAGTATCAAGAATCTAATCCCACATTATGCAGTTCATTTGTGGAATCTTGCAAGAGGGTGGTAACGTCTGGGACAGACTCTAAAATCTCGGGAATAGGTCTCAAGGATGTTTGTCAGATGGATAGCATAAGATGCTCATCTGTGTCTCCTGAGACTCTTTCAAAATCAGATTTCTATCAAGGAACAAGCAATTATGATGATGACATGTGTCAAATAGATGACAAAGATGATCTTTTTTATGGTGCATCAGTGAAGTCTGAATCTCGCATTTCGTCAGATGATATAAAGAGTTTCAACCCAATGTGTGAACCTATGGATGAATGGACATGCAATTTCGATAAAAGTCCAGATTTGGGGAGAAAGGGAACAAACTTGTCTCCTGATCAGACAATTAACAAAACAATGAGAAGCACTGAAGCATCTCGAAAGGTGGTGAATGAATTTTCATTTCCAAGTGAACCTCTAGGAGCTGATGACGATGAAGAAGTCACAGAGTCAAAAATTAGAGCTTTTCTAGATGAAAAGGCTCTGGAACTGAAGAAACTCCAAACTCCTCTTTATGAAGAATTCTTTAGCATATCAAACGCAGTTGTTCCTCCCATACCTGTTTCAATTGCACACAGCGAAGTAGTCTCAGAAGTGTCAAATGTAACACCAAAAATCAGGTCACCTAGTCAGGCTAGCAGACGATACTCAATGGCTGATGGTGCTAATATTGCAAGGCATGGATGTCATGACAAAAATCAATCTAAAGTTAGTGGTGCAAATAGTCGGCCTTTGCAGGAAATCCACCCATCTGAGCTTAACGAATGGAAAGAGACACTTCAATATGCTAAGATGGAATCATTTAGTGCTAGCTCAACTTTCTCAGAGATACAAAGGAAATGGAAGGAAGAACTTGTTGAAGAACTAGAGAGGAAGCGGGAGATGATGCGTCTGTCAGGCTTAGGAGGGAAGATTGCATCCCCAACTGATCGCAAATTTCGTAAACTTACAGATAGATCACGCTTTGCATTTCCAAGCTAG	2016	0.4276	MQEFLGSVRRSLVFRSPGGDDGGFGVGGLVDKIGSSIRKSRIGLFTQPRVRALPPVPKDNTPSIRWRKGELIGCGAFGRVYMGMNLDSGELIAVKQVLIAARSASKEKTQAHILELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIKMYTKQLLLGLEYLHKNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATMNGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSEQFQEVAALFHIGTTKSHPPIPDHLSVEAKDFLLKCLQKEPDLRPSASDLLQHPFITCEYQESNPTLCSSFVESCKRVVTSGTDSKISGIGLKDVCQMDSIRCSSVSPETLSKSDFYQGTSNYDDDMCQIDDKDDLFYGASVKSESRISSDDIKSFNPMCEPMDEWTCNFDKSPDLGRKGTNLSPDQTINKTMRSTEASRKVVNEFSFPSEPLGADDDEEVTESKIRAFLDEKALELKKLQTPLYEEFFSISNAVVPPIPVSIAHSEVVSEVSNVTPKIRSPSQASRRYSMADGANIARHGCHDKNQSKVSGANSRPLQEIHPSELNEWKETLQYAKMESFSASSTFSEIQRKWKEELVEELERKREMMRLSGLGGKIASPTDRKFRKLTDRSRFAFPS	671

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele23g1789	671	ProSiteProfiles	Protein kinase domain profile.	66	328	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele23g1789	671	Gene3D	Transferase(Phosphotransferase) domain 1	65	357	-	-
	Lele23g1789	671	SMART	serkin_6	66	328	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele23g1789	671	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	61	338	-	-
	Lele23g1789	671	ProSitePatterns	Protein kinases ATP-binding region signature.	72	95	IPR017441	GO:0005524
	Lele23g1789	671	FunFam	Mitogen-activated protein kinase kinase kinase 2	65	356	-	-
	Lele23g1789	671	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	190	202	IPR008271	GO:0004672\|GO:0006468
	Lele23g1789	671	Coils	Coil	106	126	-	-
	Lele23g1789	671	CDD	STKc_MAPKKK	65	328	-	-
	Lele23g1789	671	Pfam	Protein kinase domain	67	328	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele23g1789	671	FunFam	Serine/threonine-protein kinase STE11	62	156	-	-
	Lele23g1789	671	SUPERFAMILY	Protein kinase-like (PK-like)	65	329	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele23g1789	Lele-ChrLele23	21451861	21456656	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele23g1789	1	649	MAP Kinase Kinase Kinase	AT3G06030	58.797	0.0	686

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Lele23g1789		Pkinase	5.1e-72	CL0016