Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1787 ATGGCAGTTGTAGACGGCATTGTCAGTCTCTTTCTTCTCATTATGCTTGTTCTCATTATCGTCCTCGTCTTCTTTGCCTGTAAACCATGGCGCTTCCTTTTCTCTTCCCGGTCTCGTTCCTCCATCAAGGCTAATGAACTTGAGAGGCCTCTTGTCTTAGATGATGCAAATTTGGTGCATAACCCAAGTAGTGAATTGCCTATAGATTATGATCTTGAGGGTGCATCCATCCCCAATAAAGGTCATTTTTGCCCACCACGGCCCCCTGGAATTATTTGTAAACCAAGACTTTCTGCTGCTTCTTGCCATATGCCTCAAGATGTAATTTCTGATCCTTCAGAAGACGTTGCTGTTGACCAGACACTTAAACTGTCCCCAGCCCAGCTGGCAGAGTTTCAGAAACATCATAGAAATTTTGAAACTGACAGACTGCAAGACTTTGTACAGAGAGATATATTAGATCAAAGGAGTTGCCTCACTCTAGAGGTGATCACTGGTCCTTCTTGTGGACTTCGTTGTTCTGTACAATCAACAATTCCATCCAAGCTACCACTGACCCTGGGAAGGGTTTCTCCAAGTGATTTGTTAATCAAGGATTCAGAAGTGTCAGGAAAGCATGCACTAATAAACTGGAATTTGGAGAAAATGAAATGGGAGTTGGTAGATATGGGTAGCCTTAATGGAACACTTTTGAATTCTCAACCAATCAACCATTTAGACCCTGAAAGCAGGCAATGGAGTAATCCAATTGAGCTTGCTAATGGAGATATAATAACACTAGGAATGACATCAAAAGTAATTGTTCATATTACTTCTCAAAATAAGATTCACATTCCCTTTGGAGTTGGTATGACATCAGATCCCATGTCTAGGCATCGAGGAGGGAAAAAGCTAGCCATGGAAGATGTTTGCTATTACCAATGGCCTTTACCTGGATTAGATAAGTTTGGATTGTTTGGCATTTGTGATGGGCATGGTGGAGATGGGGCTGCCAGATATGCTAGCAAACTTTTCCCCGAAATAGTTGCAAATATATTATCAGATTCACTAAAAAGAGAGAAGGTTGTATCACTCTGTGATGCTTCAAATGTTCTAAGAGATGCATTTTCTCAAACAGAAGCTTGTATGAATCACTATTATGAGGGATGTACAGCAACAGTGCTTCTGGTTTGGGCTAATGGCAATGAAAATTTCTTTGCGCAATGTGCAAATGTTGGAGACTCTGCCTGTGTTATGAATGTTGATGGTAAAGAAATTAAGATGACAGAAGATCATAAGATAGCAAGTTATTCTGAAAGGCTGCGAATTGAAGAGACAGGCGAACCTCTGAGAGATGGGGAAACACGTCTATATGGTATAAATCTTGCGAGGATGCTTGGAGACAAATTTCTTAAACAACAGGATTCTCGTTTCAGTTCAGAGCCTTATATAAGTCAGGCCGTGCACATTGATCAGGCAAGCAGGGCTTTTGCCATACTGGCAAGTGATGGGCTATGGGATGTTATGAGCGGGAAGAAAGCAATTCAGCTAGTGCTTCAGATGAGGGAGAAATACTCCACAGATGATGATAATTCAGAGGAAAAGATTGCAAATTTGTTGTTGAGTGAGGCGAGAACACTCAGAACAAAGGATAACACCTCAATAATTTTCTTAGATTTTGATACCTTCTCCAGATTTTCTTGTAAAGCTGAGTGTTAA 1698 0.4093 MAVVDGIVSLFLLIMLVLIIVLVFFACKPWRFLFSSRSRSSIKANELERPLVLDDANLVHNPSSELPIDYDLEGASIPNKGHFCPPRPPGIICKPRLSAASCHMPQDVISDPSEDVAVDQTLKLSPAQLAEFQKHHRNFETDRLQDFVQRDILDQRSCLTLEVITGPSCGLRCSVQSTIPSKLPLTLGRVSPSDLLIKDSEVSGKHALINWNLEKMKWELVDMGSLNGTLLNSQPINHLDPESRQWSNPIELANGDIITLGMTSKVIVHITSQNKIHIPFGVGMTSDPMSRHRGGKKLAMEDVCYYQWPLPGLDKFGLFGICDGHGGDGAARYASKLFPEIVANILSDSLKREKVVSLCDASNVLRDAFSQTEACMNHYYEGCTATVLLVWANGNENFFAQCANVGDSACVMNVDGKEIKMTEDHKIASYSERLRIEETGEPLRDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQAVHIDQASRAFAILASDGLWDVMSGKKAIQLVLQMREKYSTDDDNSEEKIANLLLSEARTLRTKDNTSIIFLDFDTFSRFSCKAEC 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1787 565 SMART PP2C_4 275 551 IPR001932 -
Lele23g1787 565 SUPERFAMILY PP2C-like 290 554 IPR036457 -
Lele23g1787 565 CDD FHA 159 267 IPR000253 GO:0005515
Lele23g1787 565 PANTHER PROTEIN PHOSPHATASE 2C 271 549 IPR015655 GO:0004722|GO:0006470
Lele23g1787 565 CDD PP2Cc 292 553 IPR001932 -
Lele23g1787 565 ProSiteProfiles PPM-type phosphatase domain profile. 281 553 IPR001932 -
Lele23g1787 565 Gene3D - 288 563 IPR036457 -
Lele23g1787 565 SMART FHA_2 184 236 IPR000253 GO:0005515
Lele23g1787 565 Gene3D - 154 287 - -
Lele23g1787 565 FunFam Protein phosphatase 2C 70 289 560 - -
Lele23g1787 565 ProSitePatterns PPM-type phosphatase domain signature. 318 326 IPR000222 GO:0043169
Lele23g1787 565 SUPERFAMILY SMAD/FHA domain 157 267 IPR008984 GO:0005515
Lele23g1787 565 ProSiteProfiles Forkhead-associated (FHA) domain profile. 185 236 IPR000253 GO:0005515
Lele23g1787 565 Pfam Protein phosphatase 2C 295 546 IPR001932 -
Lele23g1787 565 FunFam Protein phosphatase 2C 70 154 288 - -
Lele23g1787 565 Pfam FHA domain 186 261 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1787 Lele-ChrLele23 21420568 21431792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1787 1 555 PP2C-type Phosphatase Gene Family AT5G19280 58.206 0.0 639