Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1773 ATGTTGGACGGCGATGTCGCCCCACCATCAATCAGAAGACCTGCGAATCATATGAATCAATATGTTGCGATGGCCTTTGTCCCTCTCTGTATCCATTTCCAGCACACACTGCTCTGCGAGGGACCCCCTCTCCTTTCTATGGAGCTTCATAAGCGCCAAGATCAGAGTCCCCCTGAGAGGAAAGGCCAGAAGCGGAAGCTGGAGGAAGATTTCGAAGACGAGCGAGAGATCTCGGCGCCTCCTACCGGCGACGCCCGGGACGCCCTTCTCGCTGAGGTCACAGCGCAGGTTGAAATTCTCGACTCCAATTTTTCAAGGCGTGATCCCGATCGAGCTGCGGCTAAGCGTGCCACTCACGTTCTCGCCGAGCTTGCTAAGAATGAGGAAGTAGTGAACGTGATTGTTGAAGGAGGCGCTATTCCGTCTCTGGTTAAGCATCTTCAAGCGCCGCCTTCGAGTGAAGGCGATCGTGATCAAACGCCATTCGAGCACGAAGTTGAGAAAGGGAGTGCCTTCGCTTTAGGACTTCTTGCCGTTAAGCCAGAACATCAACAACTAATTGTTGACAATGGTGCCTTAAAACATCTTGTTGACTTGTTAAAGAGGCATAAGAATTGCTCTACTTCTCGTGCTGTGAATAGTGTCATTCGTAGGGCTGCAGACGCAATCACTAATCTTGCTCATGAGAACAGCAACATTAAAACCCGTGTCAGGATGGAAGGTGGAATTCCACCACTTGTTGAATTGCTTGAATTTACTGATACAAAGGTGCAAAGAGCTGCTGCTGGTGCACTGCGAACTCTGGCATTTAAAAATGATGAAAATAAAAATCAGATTGTTGAATGCAATGCTCTTCCAACTCTAATTTTAATGCTCCGTTCTGAAGATGCTGCTATTCATTATGAAGCGGTTGGTGTAATAGGAAATCTGGTACACTCTTCGCCTAATATAAAGAAAGAAGTTCTTCTTGCCGGGGCTTTACAACCTGTTATTGGATTACTTAGCTCCTGCTGCTCTGAAAGCCAAAGGGAAGCTGCCTTGTTACTTGGACAGTTTGCAGCAACTGATTCAGATTGTAAGGTTCACATTGTTCAGAGAGGTGCTGTCCGACCTCTGATAGAGATGCTCCAGTCCCCTGATGTTCAACTCAGAGAAATGTCTGCCTTTGCTTTGGGGAGACTCGCACAGGACGCCCATAACCAAGCTGGTATAGCACACATTGGAGGTTTAGCACCATTACTCAAGCTCCTTGACTCGAAAAATGGGTCTTTGCAGCATAATGCTGCTTTTGCTCTTTATGGCCTTGCAGATAATGAGGATAATGTGTCCGATTTCATTAGGGTAGGTGGTGTTCAGAGACTTCAGGATGGAGAGTTTATTGTTCAAGCAACAAAAGATTGTGTTGCAAAGACATTGAAAAGATTGGAGGAGAAGATTCATGACCGTGTCCTGAACCATTTGTTATACCTTATGCGAGTTTCAGAGAAGACCGTCCAAAGACGAGTTGCTTTGGCTCTTGCTCATCTATGTTCTGCAGATGATCAGAGAACCATATTCATTGATAACAATGGTTTAGAATTTCTTATTGGGCTTCTTGGCTCCACTAGTCCTAAGCAGCAACTTGATGGCGCTGTTGCTTTATGCAAGTTGGCCAACAAAGCCACTACTCTATCACCAATAGATGCGGCTCCTCCTTCCCCAACGCCCCAGGTTTATTTGGGAGAGCAGTATGTGAATAATGCTACATTGTCTGACGTGACATTTTTGGTTGAAGGGAAACGATTTTTTGCTCACAGAATCTGCCTGCTTGCATCTTCAGATGCATTTCGTGCTATGTTTGATGGTGGTTATAGGGAGAAGGATGCAAGAGACATAGAGATTCCAAATATTAGATGGGAAGTTTTTGAGTTGATGATGAGATTCATATATACTGGATCAGTTGATGTTACTCTTGATATTACCCAAGATCTCCTCAGAGCAGCTGATCAATATCTCTTAGAAGGACTCAAGAGACTTTGTGAGTACACGATAGCACAGGATATATCACTGGAGAATGTTTCTAGTATGTATGAACTCTCAGAAGCCTTCAATGCAATTTCATTGAGGCACACATGCATCCTATTTATCTTGGAGCACTTTGATAAATTGAGTGCCAAACCGGGGCACTCTTGTCTGGTTCAGCGTATAATACCAGAGATCCGCAACTACTTTGCCAAAGCTCTCACAAAAGCTAACTCCCGTGACATCCGGCTGTAG 2256 0.4517 MLDGDVAPPSIRRPANHMNQYVAMAFVPLCIHFQHTLLCEGPPLLSMELHKRQDQSPPERKGQKRKLEEDFEDEREISAPPTGDARDALLAEVTAQVEILDSNFSRRDPDRAAAKRATHVLAELAKNEEVVNVIVEGGAIPSLVKHLQAPPSSEGDRDQTPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALKHLVDLLKRHKNCSTSRAVNSVIRRAADAITNLAHENSNIKTRVRMEGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDAHNQAGIAHIGGLAPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGVQRLQDGEFIVQATKDCVAKTLKRLEEKIHDRVLNHLLYLMRVSEKTVQRRVALALAHLCSADDQRTIFIDNNGLEFLIGLLGSTSPKQQLDGAVALCKLANKATTLSPIDAAPPSPTPQVYLGEQYVNNATLSDVTFLVEGKRFFAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDITQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFNAISLRHTCILFILEHFDKLSAKPGHSCLVQRIIPEIRNYFAKALTKANSRDIRL 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1773 751 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 191 241 IPR000225 GO:0005515
Lele23g1773 751 SUPERFAMILY POZ domain 576 678 IPR011333 -
Lele23g1773 751 SMART BTB_4 584 681 IPR000210 GO:0005515
Lele23g1773 751 Gene3D - 312 463 IPR011989 -
Lele23g1773 751 Gene3D - 93 210 IPR011989 -
Lele23g1773 751 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 367 409 IPR000225 GO:0005515
Lele23g1773 751 Gene3D - 211 311 IPR011989 -
Lele23g1773 751 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 138 192 IPR000225 GO:0005515
Lele23g1773 751 SMART arm_5 397 437 IPR000225 GO:0005515
Lele23g1773 751 SMART arm_5 314 354 IPR000225 GO:0005515
Lele23g1773 751 SMART arm_5 230 270 IPR000225 GO:0005515
Lele23g1773 751 SMART arm_5 512 552 IPR000225 GO:0005515
Lele23g1773 751 SMART arm_5 272 312 IPR000225 GO:0005515
Lele23g1773 751 SMART arm_5 356 396 IPR000225 GO:0005515
Lele23g1773 751 SMART arm_5 180 228 IPR000225 GO:0005515
Lele23g1773 751 SMART arm_5 127 179 IPR000225 GO:0005515
Lele23g1773 751 SUPERFAMILY ARM repeat 107 454 IPR016024 -
Lele23g1773 751 CDD BTB_POZ_ARIA_plant 571 686 - -
Lele23g1773 751 MobiDBLite consensus disorder prediction 50 86 - -
Lele23g1773 751 Gene3D Potassium Channel Kv1.1; Chain A 565 713 IPR011333 -
Lele23g1773 751 Pfam Armadillo/beta-catenin-like repeat 356 395 IPR000225 GO:0005515
Lele23g1773 751 Pfam Armadillo/beta-catenin-like repeat 237 269 IPR000225 GO:0005515
Lele23g1773 751 Pfam Armadillo/beta-catenin-like repeat 272 311 IPR000225 GO:0005515
Lele23g1773 751 Pfam Armadillo/beta-catenin-like repeat 181 211 IPR000225 GO:0005515
Lele23g1773 751 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 408 450 IPR000225 GO:0005515
Lele23g1773 751 Gene3D - 464 558 IPR011989 -
Lele23g1773 751 SUPERFAMILY ARM repeat 482 553 IPR016024 -
Lele23g1773 751 ProSiteProfiles BTB domain profile. 584 651 IPR000210 GO:0005515
Lele23g1773 751 MobiDBLite consensus disorder prediction 52 81 - -
Lele23g1773 751 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 241 276 IPR000225 GO:0005515
Lele23g1773 751 FunFam Armadillo/beta-catenin repeat family protein 575 719 - -
Lele23g1773 751 Pfam BTB/POZ domain 577 679 IPR000210 GO:0005515
Lele23g1773 751 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 283 325 IPR000225 GO:0005515
Lele23g1773 751 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 47 745 IPR044282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1773 Lele-ChrLele23 21298741 21307521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1773 243 447 U-box Gene Family AT1G23030 28.155 1.56e-12 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele23g1773 BTB 2.8e-25 CL0033