Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1736 ATGAGTACTTCAGATGAAGAACGCTCTGTTATAGGAAGCAAGGCAGAAATAGGGTTTCTAGATTTTGAGGAAGAGAAATCTGTCTATAGTTATGCTCCAAACGAAGAGGACCCTATTGTTATATCTATCCCATTTCCATTGGTGAATGAGAAGCCACAATCAGTATGTGTTGGCCATACTGCCGTAGATGTAATAAAGATCAAGAACAGCACCAATGAACCAGTGGAACTGTGGAGTGTTCATATTTTTGCTTCAAGTCCTGAGGATTGTTTCACACTTTCTCTGATGGAACCTCCATCAGCAAATTCAAATGCAGATAGCATTCAAGGTTTTCTAGAGTCTTTTTCTTTGGAGGACAGGATGCTTCAACCTAATGAGATTTTGAAAGTGTGGCTGTCTTGCAAAACAAAGGAAATGGGATTGCACTCCACAATTGTGAATGTTGATGCAGGGGATGCAAGAATAGAAAGGACGGTTTTTCTCTTAGCTGAAGACAAAATTTCCCAGTCTTTGGCTTCCAAAAAGCCTTATTCAAAAGGAAGAAAGAAAGAAAAATTTGTTGTAAATACTTTTGTTGCTGGTGCACGACCTGTGAGGAAGGGAAATCGTGCAAACAAGAACAGGCTTCCAACATATGACATCCCCAAGGAAACAAGAGAAATGCTGGAGAGCAATCAGATCCCTGATGCTATTGAAAGAGGTCTTACAAGGAGGAATTACGCTTCTTATTTCAAAACATTAATTATGATGGAGGAGCTACAATTGGAGGAAGACATGAGGACCTATGATATGGAATGCGTAACTTTGATGAAAAAGGCGAATCAATTCTTGTCATTGGAGGTTCCAGGGCTAGCTGAGAGAAGGCCATCACTGGTTCATGGGGACTTTATTTTTGCCAAGTTAGCCTCTGAACATGAGAAAGATAACATGCCTGCTTACCAGGGTTTTGTCCACCGTGTTGAGGCTGACAAAGTACATTTGAAGTTTGATCCTCAATTTCATTTTGTCCACAGAGATGAAGATGTCTACAACGTCCACTTCGCATATAATAGGCTCAATATGAGACGGTTATATCAGGCAGTTGAGGCTGCAGAAAACCTAGGAAATGAATTCCTATTTCCGCATGAGACATCTAGAAGGAGGCGCATTGAAACCTCTCATTTGGTGCCTATTTCTGGTAATATTAATGAGGAGCAGATGCTTGCAATCGAGAAGATTCTTGGATGCAAAGGTGCACCTCCTTATCTGATTCATGGTCCTCCAGGTACAGGAAAGACTAGTACAATAGTTGAAGCAGTCCTCCAACTCTTCAAAAATCGTAGGAAAGCTCATATTCTCATCTGTGCACCCTCAAATAGTGCTGCAGACTACCTACTTGAGAAACTCCTTGGTCAAAAGGCTGTGCAATTTCGAAATGAGGAAATATTTAGGCTTAATGCATCTACGAGGGCTTGTGAGGAGATCAAACCTGAGCTTATGCGCTTCTGCTACTTTGATGAGTGTGTGTTTAAATGTCCTCCAGTCAGGGCTCTAATGCAATATAAGATCATAGTATCAACTTATATGAGTGTTTGTATTCTTTATGCTGAAGATGTCATTCGAGGTCACTTTTCACACATTTTCTTGGATGAGGCTGGCCAGGCTTCAGAACCAGAAACAATGATCCCTATATCTCATCTCTGCAAAAGGGAGACTGTTGTCATTCTTGCCGGAGACCCAATGCAGTTGGGTCCAGTAATATATTCCAAGGAATCAGAAAGCAATGGATTGGGGAAATCATACTTGGAAAGATTGTTTGAATGTGAATTATATTCCTATGGAGATGATAATTATTTGACCAGATTGATTAGAAACTATAGATGTCACCCACAAATATTACATCTCCCTTCCAAGCTGTTTTATGAAGGAGAATTGGTTGCATGTAGGGAAGAGACTAGTTCTTCGTTCCTGAATGAAGACTTCCTCCCAAATAAGGAGTTCCCTGTTCTCTTCTTCGGCATCCAAGGATGTGATGAAAGAGAAGGGAGTAATCCATCATGGTTCAACCGAATTGAAGTGAGTAAGGTCATAGAACTAGTCCAGAAGCTTACAGCCGGTGGAAACATGAAGGATGAAGACATTGGGATTATAACACCATATAGGCAACAAGTACTTAAAATAAAGCAGACCCTTGAAAGTATAGATTTGCCGGAGATTAAAGTTGGAAGTGTTGAGCAGTTTCAGGGACAGGAGAGACGAGTTATTATAATATCAACCGTTCGCTCAACAATCAAACATAATGACTTCGACAGAGTACACTGTCTAGGATTCCTGAGCAATCATCGAAGATTCAATGTCGCTATAACCCGTGCCATATCACTGCTGATTATTATTGGAAACCCTCACATAATCTCTCGGGACTACTATTGGCACAAACTGTTGTGGCATTGTGTGGACAATTCATCTTATCTTGGGTGTTCTCTTCCTGAAAGACTGGAGGTTCAGGAGGACTCTGGCTTCAGCAATTTTCAAGAGAATGCATTGCCCTCTGAAGATGTGGAATGGGGTCAAGATCCACCACAATCTGATTCTGAGTTGCCTAAACCAGCTGCCACTGATGAAGCTGAATGGTCTGATGGTTGGAAATAG 2628 0.4113 MSTSDEERSVIGSKAEIGFLDFEEEKSVYSYAPNEEDPIVISIPFPLVNEKPQSVCVGHTAVDVIKIKNSTNEPVELWSVHIFASSPEDCFTLSLMEPPSANSNADSIQGFLESFSLEDRMLQPNEILKVWLSCKTKEMGLHSTIVNVDAGDARIERTVFLLAEDKISQSLASKKPYSKGRKKEKFVVNTFVAGARPVRKGNRANKNRLPTYDIPKETREMLESNQIPDAIERGLTRRNYASYFKTLIMMEELQLEEDMRTYDMECVTLMKKANQFLSLEVPGLAERRPSLVHGDFIFAKLASEHEKDNMPAYQGFVHRVEADKVHLKFDPQFHFVHRDEDVYNVHFAYNRLNMRRLYQAVEAAENLGNEFLFPHETSRRRRIETSHLVPISGNINEEQMLAIEKILGCKGAPPYLIHGPPGTGKTSTIVEAVLQLFKNRRKAHILICAPSNSAADYLLEKLLGQKAVQFRNEEIFRLNASTRACEEIKPELMRFCYFDECVFKCPPVRALMQYKIIVSTYMSVCILYAEDVIRGHFSHIFLDEAGQASEPETMIPISHLCKRETVVILAGDPMQLGPVIYSKESESNGLGKSYLERLFECELYSYGDDNYLTRLIRNYRCHPQILHLPSKLFYEGELVACREETSSSFLNEDFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVIELVQKLTAGGNMKDEDIGIITPYRQQVLKIKQTLESIDLPEIKVGSVEQFQGQERRVIIISTVRSTIKHNDFDRVHCLGFLSNHRRFNVAITRAISLLIIIGNPHIISRDYYWHKLLWHCVDNSSYLGCSLPERLEVQEDSGFSNFQENALPSEDVEWGQDPPQSDSELPKPAATDEAEWSDGWK 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1736 875 CDD SF1_C_Upf1 621 810 IPR041679 -
Lele23g1736 875 FunFam Probable RNA helicase SDE3 620 819 - -
Lele23g1736 875 PANTHER CANCER/TESTIS ANTIGEN 55 119 378 - -
Lele23g1736 875 Gene3D - 620 823 IPR027417 -
Lele23g1736 875 MobiDBLite consensus disorder prediction 843 875 - -
Lele23g1736 875 Pfam AAA domain 512 583 IPR041677 GO:0004386
Lele23g1736 875 Pfam AAA domain 395 482 IPR041677 GO:0004386
Lele23g1736 875 Gene3D - 317 606 IPR027417 -
Lele23g1736 875 FunFam Probable RNA helicase SDE3 344 489 - -
Lele23g1736 875 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 807 IPR027417 -
Lele23g1736 875 CDD DEXXQc_Helz-like 396 620 - -
Lele23g1736 875 Pfam AAA domain 591 794 IPR041679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1736 Lele-ChrLele23 21121485 21125953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1736 394 551 Core DNA Replication Machinery Family AT1G08840 33.540 8.18e-10 60.8