Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1729 ATGGCAGACAAAATGAAGACAGTGGCGGTTGAAACAGTAAGCGATGGTGGAAAAGGAAAGACTGAGCTCTCCAGGCCAAGGAAGATGACGGTGAAGTTAGGTGTAGGTGAAGTTTCTCTCTTCACCGTCGATTGTCTTCCATCTCAAATTCAAATGGACATGGATATGGACATTCCACTTCCAGAGGAGCTGGAATTGCTGGAATCCAATGCTCGTCTTCTCGAAGACTACCCAGATCTGGAGCCAACGGAGACCTACCCGTACGAAGACCAAGAAGCGCCATCAGCAGCACAACCACCATCATCCCCAGATCTTCATTTCGACTCTGAAATACAAGTCACCTGCCACAAGCGGTCGAGGTCGGTTAGTCCGAATGGATCACTTTCAGAAGCTGTGGAGCTGTCAGAGGAGAAAAGGTGCAGGACTGATGAGACAGCGCGGGCGACTGACGAGGACTGGCTTCGTTACTCACCAACCAAGGGTAGCGAGTCTGAAGTGGCAGAGCAAGCGAGCTTTGTGAAGGAGAAGATGTTATCCAGGTATGCGTCGGAAATCGATGGAGAGTGTATACCGATCACTGCACCCAACGGGGACAGGATTTATGCGAAGTTAGATAGGTTGGAAGGGGAGGAACGGTTGAAGAAACTGGATGTGAGAACAAATTCTGATGGTCTTATATTAGAACCCATTAATATCCTATTTGAGAAATTGGATCAAGAGGATTTCACTAAGACATTGAAAGCTAGTTCAGAATATCAAAATGTTCTGGATGTTCCTGAAACACCAATTGTCCATGAGCAACTTTGGGTAGATAAATATACCCCAAATTCATTCACTGAGCTTCTTAGTGATGAACATACAAATCGTGAGGTACTCCTGTGGGTGAAGCAATGGGATTCTAGTGTATTTGGATCGGAGATTTGCAGTACATCAGATGAAGTTTTGTCTGCTTTGAAACGACATTCTACTGTTGTCCAAAATCAGAAACCTTTAGATTCAAAATTTCAAAGAATGGGTGGAGGCCCCAAATGGAGTAACAAGAGATATAGGCATTCTATAAGTATGGATGAAAGTGGTAATTCAAAGAGCATTCAGGATATATTGAATAGGAAAGCAAAGCATACTGGTCCACCAGAACAGAAGATCCTTTTGCTTTGTGGTCCTCCCGGTCTTGGAAAAACTACACTTGCACATGTAGCTGCTAGACATTGTGGATATCACGTGGTGGAGGTTAATGCTAGTGATGATCGCAGTACATCAACAATTGAATCTAAGATCCTTGACGTGGTTCAGATGAACTCTGTCATGTCTGATTCAAGACCAAAATGCCTGGTGGTGGACGAAATTGACGGGGCACTTTCAGATGGAAAGGGTGCTGTAGAGGCTCTTTTAAAGATGGTTTCTGTTGAAAAGAAGTCTGATGCGGGAAAGGAAAATTTGGTGAAAGAGCAATCGGGAAGGAGATCCTCGAAGAAGGGACATAAGAAAGCGTCATTGTCAAGACCTGTAATTTGCATTTGCAATGACCTATATGCCTCCGCCTTGAGACCATTGCGTCAGGTAGCAAAGGTTCACATTTTTGTTCAACCAACAGTTAGTCGTGTGGTAAACAGGATCAAGTATATATGTAACAAGGAGGGGATGAAAGCTAATGCCATTGCACTTACCGCCCTAGCAGAATATACAGAATGTGATATACGCTCGTGCTTAAATACCCTCCAATTTCTCAGCAAGAAGAAAGAAACCCTCAATGTGTTTGATATTGGTTCTCAAGTGGTTGGCCGGAAAGACATGTCAAAGAATGTTCTGGACATTTGGAAGGAGGTTTTTCAAAGGAAAAAAACCAAGACAGAAAGAAAATCTCACAATAGCATGCTTTTTGAAGTTAACTCCTTGTACTCCCTTGTATCAAGCCGTGGTGATTATGACTTGATTCTTGATGGAATGCATGAAAACATTTTACGGCTCAGTTATCATGACCCAGTGATGCAGAAAACTGTCAAGTGCTTGAATAGTCTTGGAGTTTCTGATCTACTGCATCAATATATCATGCGCACACACCAAATGCCCCTTCAGGTTTATTTGCCACCCGTAGCAATTACTGTACATCGACTGGTAGCTCAAATTCAGAAGCCAAACATTGAATGGCCAAGGTCCTACCAAAGGTATCGAACGATGATGGCAGAAAAGATGGACATTTTGAATACTTGGCACTACAAAATTCCACCATATATTGCTAGGCACTTATCAGCAAGTTCCTTTGTTGAAGACTTAATTTCTCCATTATTACATATTCTGTCCCCTCCGACTATAAAACCGGTGGCATTGCAATTACTGTCTGATAAAGAGAAAAATGATCTTGCTCAATTAGTTAGCACAATGGTATCTTACTCTGTAACATATAAAAACACGAAATCAGATATGCTGCCTAATAGCCTGAGACATGAAGTAGCAGATCACTTAACATTATCATTTGATCCCCCAATCTGTGACTTCATCAATTTTAAGGATTATACATCAAATCATTATGTGCTTGCTCTACCTGTCAAGCAGATTCTTGTGCATGAGGTTGAAAAGCAAAAGATCTTGCAAGTTAAGACTGATAGGCCTTTAGGAAATATAAGTAGCAGTGGAAGGCCTGAATTCATTGAGGCTGGAACTAGAAATGCCCAGTCATCCAGAATCAATCACGCAGATGCAATTTCTCCTAAAAACATTCAAAACGAAAGTAATGTCACAAAAGCAAGGAAAAATAATGCAAATTCCACCATAGTTTCACAGAATTCGCATCCGGATAAAGGGGCAGCGGACAATATGAAATTGCAAAACACAGGAAGGATGAGAATCCCATCCGGCGGTTCCTTCTTTGACAGGTTTAGAAAGTCGAATAATAAAGGTTTTCAAAGTGATGATAGAACTGAACAGAAAGAACCAATCTTGGAGAAAGCTCTACACCCATTACTGTTCAAATTTAACGAGGGTTTTACGAACGCAGTCAAGCGGCCTGTTCGTATTCGTGAATTTCTACTTGGGATTCGTTTTGTTGCGCTGGCTGATATCAATTTCGTTTCTTGGGAGACCATTTGGAACTTCCTCGACCGCAAGTTGCAGAAATCTTCTTTAGTCATTGGAAGTATTCAGGGAGGTTTTGGGAAAGCGGGGAATGGAATATCCGGAGTTAAAGAGACAAAGAGTATCAGTGATAGAGTGATTGTTGAGAAGTTCAAGCATAATGATGAAGAAAAGGATTATGCGATCGGTCCAAGTGGTGTTAATGAGCCAGAAAATTCAGTCGAAGATGATATGCAAGAATCGAGGAAAAGAAAGAATCCATTTGTAGGTTTGTCCTCTTTTCCCTATGATTTAAAGCAGAAAGTCCTCAAGTTTGAGGATTTGTCCCCTGCGATGTTATTTCTCCGTTATTTTCTTGACAAATCAGTGGATATTGGACTGAGTGAGAACCAGACTGTTAAAAGGCAAGTGGTGATTCTTGGAGGTGAATCAACCAGAAGGCAAATAAGAACTACTGCTCGTTCTTCATGCAACAAAAGGACCCAACCGCTTTACAATCACTATAAAAATGGCCAAGGATGGTGGGACTGTGACATGGAAGGTGTTGACAACGAGGAAGTTGGCTTCCATGAAGTATGGGAAGGGGTGGGGTCCACCTCACTTGGAGAGATAGTTGATTGGCATTGA 3699 0.4201 MADKMKTVAVETVSDGGKGKTELSRPRKMTVKLGVGEVSLFTVDCLPSQIQMDMDMDIPLPEELELLESNARLLEDYPDLEPTETYPYEDQEAPSAAQPPSSPDLHFDSEIQVTCHKRSRSVSPNGSLSEAVELSEEKRCRTDETARATDEDWLRYSPTKGSESEVAEQASFVKEKMLSRYASEIDGECIPITAPNGDRIYAKLDRLEGEERLKKLDVRTNSDGLILEPINILFEKLDQEDFTKTLKASSEYQNVLDVPETPIVHEQLWVDKYTPNSFTELLSDEHTNREVLLWVKQWDSSVFGSEICSTSDEVLSALKRHSTVVQNQKPLDSKFQRMGGGPKWSNKRYRHSISMDESGNSKSIQDILNRKAKHTGPPEQKILLLCGPPGLGKTTLAHVAARHCGYHVVEVNASDDRSTSTIESKILDVVQMNSVMSDSRPKCLVVDEIDGALSDGKGAVEALLKMVSVEKKSDAGKENLVKEQSGRRSSKKGHKKASLSRPVICICNDLYASALRPLRQVAKVHIFVQPTVSRVVNRIKYICNKEGMKANAIALTALAEYTECDIRSCLNTLQFLSKKKETLNVFDIGSQVVGRKDMSKNVLDIWKEVFQRKKTKTERKSHNSMLFEVNSLYSLVSSRGDYDLILDGMHENILRLSYHDPVMQKTVKCLNSLGVSDLLHQYIMRTHQMPLQVYLPPVAITVHRLVAQIQKPNIEWPRSYQRYRTMMAEKMDILNTWHYKIPPYIARHLSASSFVEDLISPLLHILSPPTIKPVALQLLSDKEKNDLAQLVSTMVSYSVTYKNTKSDMLPNSLRHEVADHLTLSFDPPICDFINFKDYTSNHYVLALPVKQILVHEVEKQKILQVKTDRPLGNISSSGRPEFIEAGTRNAQSSRINHADAISPKNIQNESNVTKARKNNANSTIVSQNSHPDKGAADNMKLQNTGRMRIPSGGSFFDRFRKSNNKGFQSDDRTEQKEPILEKALHPLLFKFNEGFTNAVKRPVRIREFLLGIRFVALADINFVSWETIWNFLDRKLQKSSLVIGSIQGGFGKAGNGISGVKETKSISDRVIVEKFKHNDEEKDYAIGPSGVNEPENSVEDDMQESRKRKNPFVGLSSFPYDLKQKVLKFEDLSPAMLFLRYFLDKSVDIGLSENQTVKRQVVILGGESTRRQIRTTARSSCNKRTQPLYNHYKNGQGWWDCDMEGVDNEEVGFHEVWEGVGSTSLGEIVDWH 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1729 1232 Gene3D - 530 600 - -
Lele23g1729 1232 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 54 1010 - -
Lele23g1729 1232 MobiDBLite consensus disorder prediction 1083 1105 - -
Lele23g1729 1232 CDD HLD_clamp_RFC 530 588 - -
Lele23g1729 1232 Gene3D - 266 528 IPR027417 -
Lele23g1729 1232 MobiDBLite consensus disorder prediction 132 146 - -
Lele23g1729 1232 MobiDBLite consensus disorder prediction 116 130 - -
Lele23g1729 1232 MobiDBLite consensus disorder prediction 1 25 - -
Lele23g1729 1232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 585 IPR027417 -
Lele23g1729 1232 MobiDBLite consensus disorder prediction 475 495 - -
Lele23g1729 1232 CDD AAA 378 530 - -
Lele23g1729 1232 SMART AAA_5 379 533 IPR003593 -
Lele23g1729 1232 FunFam Chromosome transmission fidelity protein 18 530 597 - -
Lele23g1729 1232 MobiDBLite consensus disorder prediction 80 146 - -
Lele23g1729 1232 Pfam ATPase family associated with various cellular activities (AAA) 383 518 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1729 Lele-ChrLele23 21049508 21065100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1729 380 588 Core DNA Replication Machinery Family AT5G22010 29.018 3.09e-14 75.9