Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1720 ATGACTGGCTTGAACTTTGCACGTGATACAAAAGAAAATATGGAGGATATTGAGATTGATCAAATTGTGGATGTGCGTGACACTCCTGATAGATTGACTGCTAGGGTTGGTCGAAAATATGCTGGTAATCCTGATGTTTATGTGAATGGGAAGGGAGAGAGGGTTCCCCCTTTTACTGAAAACGGTAAGAATGGAAGATTTCCCTTTTGTCTTTCAAAGAGCTCAAACGGTGGTGAAATGAATAACTGCATAGCTGCATCCTCATCAAATAATTCTTATGCTTCTCAAAATGCTCCCCTATTTAGAAGGTCCCAATCTAACAAATCTTCTAGTAAAGAGTTCGCATACACTGCTGGATCTGAAAAGATGGAGAAAGGGAAAAATATAGGCCCTAAATTTCCTTCTAAATCATCTTCCAGTGGCTATGGGGGTGTTACTGTGTTTGATTTGACTGAAGAAAATGGGCAGCCCCAAAAACTCAAACCATTTTTCTCACATCATGGATTGAAGGATAATGCAACTGACACCAAGAAAGACGGGAAAGCAGGCATTGGGAACTCTCCTATATCTTGCATCCCTGATTCTTCAAATACATCTAGCAATGCCTTACGAGGAAAGTGTAAAATAGATGATAAAACACAACTATGCTCGAATATAACTGTTGATCGTGGTAAGATTATTGATCTATCAGGTGATTCTCAGCAAAAACCTGAAAAGCAGGCGGTGTCTCCGCGCCTTATAACTGCCCCAAGATTCAGAGGGCAGAAGCGATTGGTGCGAAATGGCTGTATCTCACCTTATAATATTGCAGCTAGAGCAAAACAATCAGCTGAACAGAATGATGTTGAACAGAGCCATGCGGAGGATGATGTTTCTAGCAATAAAACGTCCCACATGAGTATCAATGATATAGTTGCTGAAGAGAGAAGCAGTAACAGAGTGAAGGGAGAAGAATTTTTTGTCCACCCTTCAAGTGTGCATGATGCCAGAACTATCAAAACAGCTAGCAGCAGCCCTATGGATAATCATGAAGAGACCAATGGTACCAGTGATGCTATCGGAAATTCACATGAAAGTTTTGGGGGATCAGAAGGTTTGACAATAACACGTAACTGCAGAACTACTCATTGGCCCTTGCATGATGTAACTGGGCATCGTTCAAGAAGAGGTGAAGATTCTGAAAGATTTATTAGCACACAATGTAGGAACGGAGTGGGTAGAAGAGGCACTGGGAGCAGTCAAAACACTATGGATGTAAGGTATCCTCTAGTAAATCATGCGACTTCTCTGATCATTCCTGATGCTGAACAGTCAACTAGACCTTGTAATACAGCAGACAAGCTGACTAAAAGGCAAAGGAAAAACGTATCAACCTCTAGAAATCTTAATCCAGAGATTATGATTCTTGATTCACCTGGGGAATCATCAAATTTAAGCTCACCTAGAAGCTCTGAAATTGTTGAGCAATTACCTGGAACAACATACACACACAGAGCATCCCATGATTCCGATGACATGAATCCTGGTGACTCATATACTCGGGCTAGACAGGTAGAAGCAGATGAGATATTGGCCCGTGAACTTCAAGAACAACTATATCATGAGGATTCTTTTCACGGGGGAGAGCATATGGATGAACATTTAGCATGGGCATTGCAACATGAGGAGGAACTTCTGCATACATCTACTGAGAGTCACCATATATCACGCCCTAGATTGTTGTCAAGGGAAGCCTCAAATAGACAGCCTCGTTCTCGGTCTCATCAAAGTCCTACAAATAGAAGGAGAGCTGCGCCTCATGCCCCTCCCTCTAATAGAGTGTCACAGTTGAGGAGTCGTTTTTTAAATCGGTCTTCAGTGCCTGCTGCCATCCCATCTAGAGGAAGGCGTCTTCGGTTTCCTGTGGATATGGACTTTGACATGAGACTTGATATATTGGAAGCATTGGAGGATGCAGTAGGGGATATTAGTGACATGGGAATTGCTGAAGACATGTTTCAAGCTCATCGAGACTTCAATGAAAATGATTATGAAATGTTATTGGCCCTTGATGACAACAATCATCAACATGCGGGTGCATCTGTCCATCAGATCTATAGTTTGCCGCAGTCCACTATACAGACTGATAACTTCCAAGAGGCGTGCGCCATATGTCTTGAGATTCCAGCTATGGGCGAAACCATTCGCCATCTTCCTTGTTTGCACAAATTTCACAAAGATTGTATTGATCCTTGGCTCCGTAGAAGGACCTCGTGCCCAGTGTGCAAGTCATCTATAACATAA 2283 0.4236 MTGLNFARDTKENMEDIEIDQIVDVRDTPDRLTARVGRKYAGNPDVYVNGKGERVPPFTENGKNGRFPFCLSKSSNGGEMNNCIAASSSNNSYASQNAPLFRRSQSNKSSSKEFAYTAGSEKMEKGKNIGPKFPSKSSSSGYGGVTVFDLTEENGQPQKLKPFFSHHGLKDNATDTKKDGKAGIGNSPISCIPDSSNTSSNALRGKCKIDDKTQLCSNITVDRGKIIDLSGDSQQKPEKQAVSPRLITAPRFRGQKRLVRNGCISPYNIAARAKQSAEQNDVEQSHAEDDVSSNKTSHMSINDIVAEERSSNRVKGEEFFVHPSSVHDARTIKTASSSPMDNHEETNGTSDAIGNSHESFGGSEGLTITRNCRTTHWPLHDVTGHRSRRGEDSERFISTQCRNGVGRRGTGSSQNTMDVRYPLVNHATSLIIPDAEQSTRPCNTADKLTKRQRKNVSTSRNLNPEIMILDSPGESSNLSSPRSSEIVEQLPGTTYTHRASHDSDDMNPGDSYTRARQVEADEILARELQEQLYHEDSFHGGEHMDEHLAWALQHEEELLHTSTESHHISRPRLLSREASNRQPRSRSHQSPTNRRRAAPHAPPSNRVSQLRSRFLNRSSVPAAIPSRGRRLRFPVDMDFDMRLDILEALEDAVGDISDMGIAEDMFQAHRDFNENDYEMLLALDDNNHQHAGASVHQIYSLPQSTIQTDNFQEACAICLEIPAMGETIRHLPCLHKFHKDCIDPWLRRRTSCPVCKSSIT 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1720 760 MobiDBLite consensus disorder prediction 164 178 - -
Lele23g1720 760 MobiDBLite consensus disorder prediction 279 293 - -
Lele23g1720 760 MobiDBLite consensus disorder prediction 561 609 - -
Lele23g1720 760 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 681 760 IPR013083 -
Lele23g1720 760 MobiDBLite consensus disorder prediction 335 366 - -
Lele23g1720 760 FunFam RING/U-box superfamily protein 680 760 - -
Lele23g1720 760 Pfam Ring finger domain 714 756 IPR001841 -
Lele23g1720 760 ProSiteProfiles Zinc finger RING-type profile. 715 756 IPR001841 -
Lele23g1720 760 SUPERFAMILY RING/U-box 714 759 - -
Lele23g1720 760 CDD mRING-H2-C3H2C2D_ZSWM2 715 756 - -
Lele23g1720 760 MobiDBLite consensus disorder prediction 101 116 - -
Lele23g1720 760 SMART ring_2 715 755 IPR001841 -
Lele23g1720 760 MobiDBLite consensus disorder prediction 101 139 - -
Lele23g1720 760 MobiDBLite consensus disorder prediction 275 300 - -
Lele23g1720 760 MobiDBLite consensus disorder prediction 163 197 - -
Lele23g1720 760 MobiDBLite consensus disorder prediction 561 583 - -
Lele23g1720 760 PANTHER SI:CH211-59O9.10 387 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1720 Lele-ChrLele23 20991531 20995251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1720 464 760 C3H Transcription Factor Family AT1G04790 43.030 1.15e-67 233