Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1713 ATGCCATTGAAGGAGCAGGAGCAGAAGCGTGGTCCACTGTTCCTTCTTCCGTCCAAACCAGCTCACTCACGGCCATTTCCATTGAAGCAGCGTCAAATCATGATTGTGATATACTGTCAAGTCTTTTTCAGTTCTATAGGATTTGGAATGGATTCAGATTTTTCACCTTTTATCTCTGTTGCCATTTTCCCCCCTTTTTTCTGGACTTGTGAGTGTCTCTCTATCAAAATAGAAACAAAAGAAACGGATGAAGATGAGCCACATATCGAAGACGTACAAGGCTCAAGACACGAGCAGTTGCTGCTATGGTGGCCAGTGGGGAGTGACGGCGACGGCGACGGCCACGGCGCAGGAAGAAAGAGGCCTCTAACCCCAGAAATCAGAAATTTTGGGAAAATGAAGCAAATCTTGGTGTTTTTCTTCTCTGTCGTCGTCATCACTCTCTTCTTATGTACGACTCTTGCTTTCTCTTATAACCATGAAGCTTTTCTGCTATATTCATGGCTTCACAGCTCGCCCTCACCACCACCTTCACATTTCTCTAACTGGAACATTGGTGACAGAAACCCATGCAATTGGACCTCCATAACTTGTTCTCGTCAAGGTTTCGTCACGAAAATCAATGTTTCTTCTGTCCATCTTGACTTGCATCTACCTTCCAATCTCTCTTCCTTTCGCTTCCTCAGAAAACTTATCATACCAAATGCAAATCTCACCGGAACCATCGCTTCCGACATCGGTGCTTGTTCCTCCCTTACCGTCATTTATCTTAGCCATAATAGTCTAACTGGTTCTATTCCTGCAAGTGTTGGGAATTTACCAAATCTCCAGATTTTGGCCTTAAACTCCAACTTCCTCAGTGGAGAAATCCCATATGAGCTAAGTAATTGCATTGGCCTGAAATCTCTCTTCCTTTCAAATAATCAGCTGGGTGGGACTATCCCATCTTCGCTGGGAAAATTATCAAAACTTGAGAATTTTAGAGCAGGAGGGAACAACAACATTACTGGCCATATACCACATGAGCTGGGAAATTGCATTAATTTGGTTTCTTTGGGGTTGACTGAAACCAGCATATCAGGTTCTTTGCCAGCTTCGTTGGGTAGGCTTAAGAAGCTTCAGAGGCTGTCCCTTTGTGATACTATGCTTTCTGGTGAGATTCCATCTGAGATAGGTAATTGCTCTGAGCTTGTTGAGTTGAGGCTATGCAAAAATAATCTATCAGGTTCTATTCCATCTGATATAGGGAAGCTTCAGAAGCTACAGGTTTTGAGTCTATGGAATAATTTTATTGTTGGGGCTATTCCTGAAGAGATTGGTAACTGTACAAGCTTGAGAACGCTCGAGCTTTCTTTGAATTCTCTATCTGGAACCATCCCTTTGTCTGTGGGTAATCTTATGAAGCTTGAAAAGTTTTTGGTTGCTGAAAACAATATCTCTGGTTCTATACCTTCAACTCTTTCAAATGCCACAAATCTGCAAAGATTGGAACTTTACATGAATCAAATCTCAGGTTTGATCCCATCGGAGCTTGGGAGGTTGCAAAAGCTCACTCAGTTCTATGCTTGGGACAACCAGCTTGAAGGAACCATCCCTTCTACTTTAGCCAATCTCAGTAGACTCCAAAAGCTTGATTTGTCCATGAATTCATTTATTGGAAGCATTCCAAAAGGTCTCTTTCTGCTTCAAAACCTCAAAGCGTTGGATATTATTTCCACTGATATATCAGGCGCAATTCCCCAGGAGATAGGAAGTTGCAGCTCTCTTGAAAGGCTGAGTCTTAGAAACAATCGAATTTATGGTGAGATTCCAAAGACAATTGGTGGTTTGAAGAACTTAAATTTGTTTGACATCTCTAATAATTGCCTGAACGGGTCATTGCCTGATGAGATTGGTGGCTGCTCAAAACTGGAAAAGATAAACCTTAGCAACAATGTATTAGAAGGTCCACTGCCTGAGTCACTGTCAACACTACCCAATCTTTCAGTTTTGAATGCATCTATTAATAAATTTGAAGGTCAGATACCTACAAGCTTAGGTAATCTTTCTTCCCTAATTGATCTGGTACTGAGCAGAAACAAATTCTCCGGAACCATTCCTCAATCACTTGGTCTGTGTTCAAAACTCCAAATGCTTGATCTTAGTAGCAATGAACTCGCTGGAAGCATACCAAAAGAGTTAGGTGATATCAGAACTCTTGCAGTTGTTCTTAACCTCAGTCACAACTCTCTTAAAGGATCAATTCCTTCTGAAATATCTAAATTAAACATGCTCTCGGCGATGGACATTTCACATAATATGTTGGAAGGAGGTTTGCAGCCTCTTTCTCACCTTGCAAGTCTTGTTTCTCTCAATATTTCTCACAATCACTTCACTGGCTATCTTCCTGACACTAGGATTTTTAGACACTTATCACCAGAAGAAATTAAGGGAAACAGTGGCCTTTGTTCTAGGATTCAGGATTCATGCTTCTTAAAAGATCACTCACGCAGGGAAAAACTGACTGAAAACATGAACTCAACAATTCTTAAGCTGATAATCGGATTGCTGGTAGTCTCGATAGTGATATTTATTGTTACAGTAATCATTTCAGTTACCAGGAGAAGAACAATCGGAGACAGTAATAATGGTTCCTCAGAAGAGATGGGAAACACATGGAGATGGCAATTCATTCCATTTCAGAGGTTAAATTTCTCAGTTGAGCAGGTAATCAGAAGTTTAAAAGACGAAAATATAATAGGAAAAGGATGCTCAGGAGTTGTGCATCGTGTTGATATTGGTAATAATGAAGCCATAGCCGTGAAGAAATTGAGGGCAGCACCAGCTCCAATGGTTTCAGGTGGTGATGGACCCAATAATAATGACGACTCATTCTCGAGAGAGCTGAGAATCCTGGGTTTAATCCGACATAGGAACATTGTGAGACTCCTAGGGTGCTGTTGGAGTCGAACCACAAGATTGCTTATGTATGAGTATATGCCAAATGGGAACTTAGGCAGTCTACTTCATGAGAGGGATGAAGAAAATTCTTGTTTGGAATGGGAAGTGAGGTACAAAATCTTGTTGGGTGCTGCACAGGGCCTTGAATATCTTCACCATGATACAGAACCTCCAATAGTTCACAGAGATATCAAAAGCAGTAACATCCTCATTGGCCCTGAATTTGATGCTTGCATTGCTGATTTTGGCTTGGCTGAGTTCGTTGACGATTGTGGCGTCGGAAACTCCTCCAGTACAGTCGCTGGTTCTTGGGGATATATGGCTCCTGAGTATTGCTACATGACGAAGATCACTGAGAAGAGTGACGTGTATAGTTTTGGTGTAGTGATGCTGGAAGTGCTCACAGGTAAGAAACCGATTGATCCAAGCATACCTGATGGGTTACATGTTGCTGAGTGGGTAAGACAAAACAGTGAACAAGTACAAGTCCTAGACCCCACATTGCAATCTGCATCAGAATCGGAAATAGAAGAAATGAAGGAAGCATTAAGCATTGCCCTATTGTGCTTAAGTTCTGCCCCAGATCAAAGACCTACAATGAGGGACGTGGCAACCATTATCAGGGAAATTAAACCAGTGAATGAGGAATATGCTGATTTTGATGCCCTTTTAAAGGACTCTCCTGCAACACTTACTGGGGCTGCTGCAGATCAATCTTCTTCACAAGCACATGCAGCACTAAGCTTGTACCTTATGAAAGGAAACAAAGCAAGCCCCTCTACTCTATCTTCACCAAGAAGATCATCTTTTTCTATAGTTGAATTGAGCTAG 3771 0.4169 MPLKEQEQKRGPLFLLPSKPAHSRPFPLKQRQIMIVIYCQVFFSSIGFGMDSDFSPFISVAIFPPFFWTCECLSIKIETKETDEDEPHIEDVQGSRHEQLLLWWPVGSDGDGDGHGAGRKRPLTPEIRNFGKMKQILVFFFSVVVITLFLCTTLAFSYNHEAFLLYSWLHSSPSPPPSHFSNWNIGDRNPCNWTSITCSRQGFVTKINVSSVHLDLHLPSNLSSFRFLRKLIIPNANLTGTIASDIGACSSLTVIYLSHNSLTGSIPASVGNLPNLQILALNSNFLSGEIPYELSNCIGLKSLFLSNNQLGGTIPSSLGKLSKLENFRAGGNNNITGHIPHELGNCINLVSLGLTETSISGSLPASLGRLKKLQRLSLCDTMLSGEIPSEIGNCSELVELRLCKNNLSGSIPSDIGKLQKLQVLSLWNNFIVGAIPEEIGNCTSLRTLELSLNSLSGTIPLSVGNLMKLEKFLVAENNISGSIPSTLSNATNLQRLELYMNQISGLIPSELGRLQKLTQFYAWDNQLEGTIPSTLANLSRLQKLDLSMNSFIGSIPKGLFLLQNLKALDIISTDISGAIPQEIGSCSSLERLSLRNNRIYGEIPKTIGGLKNLNLFDISNNCLNGSLPDEIGGCSKLEKINLSNNVLEGPLPESLSTLPNLSVLNASINKFEGQIPTSLGNLSSLIDLVLSRNKFSGTIPQSLGLCSKLQMLDLSSNELAGSIPKELGDIRTLAVVLNLSHNSLKGSIPSEISKLNMLSAMDISHNMLEGGLQPLSHLASLVSLNISHNHFTGYLPDTRIFRHLSPEEIKGNSGLCSRIQDSCFLKDHSRREKLTENMNSTILKLIIGLLVVSIVIFIVTVIISVTRRRTIGDSNNGSSEEMGNTWRWQFIPFQRLNFSVEQVIRSLKDENIIGKGCSGVVHRVDIGNNEAIAVKKLRAAPAPMVSGGDGPNNNDDSFSRELRILGLIRHRNIVRLLGCCWSRTTRLLMYEYMPNGNLGSLLHERDEENSCLEWEVRYKILLGAAQGLEYLHHDTEPPIVHRDIKSSNILIGPEFDACIADFGLAEFVDDCGVGNSSSTVAGSWGYMAPEYCYMTKITEKSDVYSFGVVMLEVLTGKKPIDPSIPDGLHVAEWVRQNSEQVQVLDPTLQSASESEIEEMKEALSIALLCLSSAPDQRPTMRDVATIIREIKPVNEEYADFDALLKDSPATLTGAAADQSSSQAHAALSLYLMKGNKASPSTLSSPRRSSFSIVELS 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1713 1256 SMART serkin_6 907 1187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1713 1256 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 993 1205 - -
Lele23g1713 1256 Gene3D Ribonuclease Inhibitor 158 313 IPR032675 -
Lele23g1713 1256 FunFam LRR receptor-like serine/threonine-protein kinase 660 731 - -
Lele23g1713 1256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1039 1051 IPR008271 GO:0004672|GO:0006468
Lele23g1713 1256 ProSiteProfiles Protein kinase domain profile. 907 1198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1713 1256 SUPERFAMILY L domain-like 507 840 - -
Lele23g1713 1256 MobiDBLite consensus disorder prediction 1236 1256 - -
Lele23g1713 1256 Pfam Leucine rich repeat 588 647 IPR001611 GO:0005515
Lele23g1713 1256 SUPERFAMILY L domain-like 167 528 - -
Lele23g1713 1256 ProSitePatterns Protein kinases ATP-binding region signature. 913 936 IPR017441 GO:0005524
Lele23g1713 1256 Gene3D Phosphorylase Kinase; domain 1 892 992 - -
Lele23g1713 1256 FunFam Nuclear pore complex protein NUP107 158 316 - -
Lele23g1713 1256 Gene3D Ribonuclease Inhibitor 412 510 IPR032675 -
Lele23g1713 1256 Gene3D Ribonuclease Inhibitor 314 411 IPR032675 -
Lele23g1713 1256 Gene3D Transferase(Phosphotransferase) domain 1 993 1205 - -
Lele23g1713 1256 FunFam Putative LRR receptor-like serine/threonine-protein kinase 736 821 - -
Lele23g1713 1256 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 420 1182 - -
Lele23g1713 1256 SMART LRR_typ_2 610 634 IPR003591 -
Lele23g1713 1256 SMART LRR_typ_2 778 803 IPR003591 -
Lele23g1713 1256 SMART LRR_typ_2 682 706 IPR003591 -
Lele23g1713 1256 SMART LRR_typ_2 298 321 IPR003591 -
Lele23g1713 1256 SMART LRR_typ_2 418 442 IPR003591 -
Lele23g1713 1256 SMART LRR_typ_2 370 394 IPR003591 -
Lele23g1713 1256 SMART LRR_typ_2 273 297 IPR003591 -
Lele23g1713 1256 SMART LRR_typ_2 538 562 IPR003591 -
Lele23g1713 1256 Pfam Leucine Rich Repeat 251 273 IPR001611 GO:0005515
Lele23g1713 1256 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 557 651 - -
Lele23g1713 1256 SUPERFAMILY Protein kinase-like (PK-like) 885 1185 IPR011009 -
Lele23g1713 1256 Gene3D Ribonuclease Inhibitor 535 826 IPR032675 -
Lele23g1713 1256 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 333 556 - -
Lele23g1713 1256 Pfam Leucine rich repeat N-terminal domain 167 199 IPR013210 -
Lele23g1713 1256 Pfam Protein kinase domain 909 1183 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1713 Lele-ChrLele23 20941546 20950319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1713 156 1203 Receptor kinase-like Gene Family AT5G56040 43.450 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele23g1713 Pkinase 7.8e-43 CL0016