Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1707 ATGAGTTGTGGTGGTTCTTCTTCATCATCGTCATCATCAAGATGGTGCCCAACCCAGGAACAGCTTGTGATTCTTGAGGAGATGTACAGAGTTGGGATCAGGACTCCGAATGCGTCCCAGATTAAGCATATCACAGCTCAACTCTCCTTCTATGGCAAGATAGAGGGCAAGAATGTTTTCTACTGGTTTCAGAACCACAAGGCCAGGGACCGCCAGAAACTCCGCCGCAAATTCAACAAGCAACTTCAGTTACAGCAGCAGCAGCAACGCCACCAGCTCTTTAACTATTGCCTTCACCTTCACCATCTGAATCACAACTATGACGCTCACCATTATTCTCACTCTCTTATTACTGCTGCCTCATCATCTTCCCAACAACAACATTCCTTTTACAACTCCCTTGCCTCGTTCTCACAGGGAGGAGCTGGAGAAGCATCAAAACAAGGCATAGATTACAAATGGAAGATTGCGAATACAGGAGTGATGGAGAAGACATTAAAGCAAGATTGGAGGAGGAGGACGACGGCGGAATGTTATGTATATGACTGTGTGTGA 555 0.4613 MSCGGSSSSSSSSRWCPTQEQLVILEEMYRVGIRTPNASQIKHITAQLSFYGKIEGKNVFYWFQNHKARDRQKLRRKFNKQLQLQQQQQRHQLFNYCLHLHHLNHNYDAHHYSHSLITAASSSSQQQHSFYNSLASFSQGGAGEASKQGIDYKWKIANTGVMEKTLKQDWRRRTTAECYVYDCV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1707 184 Gene3D - 4 73 - -
Lele23g1707 184 Pfam Homeodomain 12 72 IPR001356 GO:0003677
Lele23g1707 184 CDD homeodomain 14 73 IPR001356 GO:0003677
Lele23g1707 184 ProSiteProfiles 'Homeobox' domain profile. 8 73 IPR001356 GO:0003677
Lele23g1707 184 SUPERFAMILY Homeodomain-like 7 75 IPR009057 -
Lele23g1707 184 FunFam WUSCHEL-related homeobox 4 12 79 - -
Lele23g1707 184 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 4 141 IPR044555 GO:0003700|GO:0099402
Lele23g1707 184 SMART HOX_1 10 77 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1707 Lele-ChrLele23 20917414 20918452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1707 8 80 Wox Gene Family AT2G28610 78.082 1.62e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele23g1707 Homeodomain 1.5e-17 CL0123