Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1706 ATGGCTTTGCCTTGCGCATTCGTCAGAGCTGTGACAATCCTCTGTGTGGTGATGATACTTGCCACACGTAGTGAAGCAGGTCTTAAGATTCCAAGAAGAACGGTGAGGATGACAAATGATCTGGGAGGTGGCCTAGATCTCACCGTTCATTGCAAGCAGAAGGGTGAAGATCTGGGAGAGCATCTTCTTCATCCTAATGAAACCTATGAGTTCACGTTCAGGACTAATTTCTGGGGCACCACCCTTTACTTCTGCAGCTTCTCATGGCCTGGTGCTTTTCACTGGTTCGACATTTTCATCATGAAGAGGGATCATTCCAACTGCGTTACCTGTATCTGGCAAATCAGGCAAGACAAGCCCTGCCGCCTCGGCAAGAAAAGCCATGCCTTTGATGACTGCTTCAACTGGAAACCAAGTTCATTCATCCCTCGTCTTTCTTAA 441 0.4762 MALPCAFVRAVTILCVVMILATRSEAGLKIPRRTVRMTNDLGGGLDLTVHCKQKGEDLGEHLLHPNETYEFTFRTNFWGTTLYFCSFSWPGAFHWFDIFIMKRDHSNCVTCIWQIRQDKPCRLGKKSHAFDDCFNWKPSSFIPRLS 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1706 146 Pfam Plant self-incompatibility protein S1 34 136 IPR010264 -
Lele23g1706 146 PANTHER - 32 124 IPR010264 -
Lele23g1706 146 SUPERFAMILY Cupredoxins 43 89 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1706 Lele-ChrLele23 20915943 20916383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1706 26 141 Carbohydrate Esterase AT3G16970 45.000 1.50e-32 110