LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele23g1683	ATGGCAATGCCGACTTGCTCCGCGGAGCTTGCCCAGTACTTCGGTCCCAACTTCGCCAATGCTACAGCAGCCGCCGACCTCATCTGCAACAAGCTCTCCGACACCACCTTCGCCGTCGACAACACCTTCCTTCTCTTCTCTGCTTACCTTGTCTTCTCCATGCAGCTCGGCTTTGCCATGCTGTGTGCCGGCTCCGTTCGTGCTAAAAACACCATGAACATCATGCTCACCAACGTTCTCGATGCTGCTGCCGGCGGCCTCTTCTACTACCTCTTTGGCTTTGCTTTCGCCTTTGGATCCCCCTCCAACGTATTCATTGGTCGTCACTCCTTCGGCCTCAACGACTTTCCGTCGACGCTCTTCGATTATAGCTACTTCCTCTACCAATGGGCCTTTGCCATCGCCGCCGCCGGCATAACCAGCGGCTCCATCGCCGAGCGGACTCAGTTTGTCGCTTACCTAATCTACTCCTCTTTCCTGACCGGGTTCGTTTACCCTGTTGTGTCTCATTGGGTCTGGTCCACTGACGGTTGGGCTAACGCAATGCGGTCAGACCTTCTATTCGGATCCGGTGCCATCGATTTCGCCGGTTCAGGCGTTGTCCACATGGTGGGCGGTGTCGCTGGTCTGTGGGGCGCACTCATAGAAGGGCCTAGGATCGGTCGATTTGACCATTCCGGTCGACCAGTCTCGCTTCGCGGGCACAGTGCCACCCTGGTTGTTCTCGGAACTTTCTTGCTCTGGTTCGGATGGTACGGTTTTAACCCGGGTTCATTCTTAAAGATTCTGAACCATTACGAGCCCGGAAACTACTACGGGCAGTGGAGCGCGGTGGGTAGAGCCGCCGTGACTACCACCTTAGCCGGCTGCACCGCCGCTCTGACTACTCTCTTCGGGAAGAGGATTGACTCGGGTCACTGGAACGTGACGGACGTATGCAACGGGCTGCTCGGCGGATTTGCCGCCATCACCGCCGGATGCTCCGTCGTTGAGCCGTGGGCGGCAGTCATTTGCGGGTTCGTGGCGGCAGTGGTACTGATTTCATGCAACAAACTTGCGCAGAAGATGAAGTTCGACGACCCGTTGGAGGCCGCACAGCTGCACGGCGGGTGTGGAGCGTGGGGGCTGATCTTCACGGCGCTCTTTGCGAAGAAGAAGTACGTGAACGAGGTGTACGGAGGGCCGGCCGATCGGCCATATGGGTTGTTCATGGGTGGTGGGGGGAAGCTGTTGGCGGCAAATATAGTGGAGATTGTGGTGATTATTGGGTGGGTCAGTGTGACCATGGGCCCTCTGTTCTTGATTCTTCACAAGCTGGGACTATTGAGAATCTCCAGAGAAGATGAATTGGAAGGCATGGATCTGACACGACACGGTGGGTTTGCGTATGCGTACGAGGATTCATCCTCAAGGAACGGGATTATACAGATGGAGATGGAAAGAATGGAAAATGCAGGCGCTCAAACCACAGGGTAG	1476	0.5623	MAMPTCSAELAQYFGPNFANATAAADLICNKLSDTTFAVDNTFLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGSPSNVFIGRHSFGLNDFPSTLFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWVWSTDGWANAMRSDLLFGSGAIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHSGRPVSLRGHSATLVVLGTFLLWFGWYGFNPGSFLKILNHYEPGNYYGQWSAVGRAAVTTTLAGCTAALTTLFGKRIDSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAVICGFVAAVVLISCNKLAQKMKFDDPLEAAQLHGGCGAWGLIFTALFAKKKYVNEVYGGPADRPYGLFMGGGGKLLAANIVEIVVIIGWVSVTMGPLFLILHKLGLLRISREDELEGMDLTRHGGFAYAYEDSSSRNGIIQMEMERMENAGAQTTG	491

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele23g1683	491	Gene3D	Ammonium transporter AmtB like domains	15	482	IPR029020	-
	Lele23g1683	491	PANTHER	AMMONIUM TRANSPORTER	30	459	-	-
	Lele23g1683	491	FunFam	Ammonium transporter	21	477	-	-
	Lele23g1683	491	TIGRFAM	amt: ammonium transporter	40	463	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Lele23g1683	491	ProSitePatterns	Ammonium transporters signature.	194	219	IPR018047	GO:0008519\|GO:0016020\|GO:0072488
	Lele23g1683	491	Pfam	Ammonium Transporter Family	43	463	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Lele23g1683	491	SUPERFAMILY	Ammonium transporter	39	444	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele23g1683	Lele-ChrLele23	20754282	20755757	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele23g1683	5	490	Inorganic Solute Cotransporters	AT4G13510	76.553	0.0	760