Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1676 ATGGGTTGGGGTATGAACATGATTGAGGAAGAAGGTTGGAGGAAAGGTCCTTGGACTGCTGAAGAAGACAGATTGCTTATTGAATATGTTAGGCTTCATGGTGAAGGCAGATGGAACTCTGTCTCTAGGCTTGCAGAAGATGATGTTTGTTTCATGTTTTCGTCTGAAACAGGATTGAAAAGAAATGGGAAAAGCTGCAGATTGAGGTGGGTGAATTATTTGAGGCCTGACCTGAAGAAGGGTCAGATAACACCTCAGGAAGAGAGCATCATTCTTGAGCTGCATGGTAGATGGGGAAACAGGTGGTCAACAATTGCAAGAAGCTTGCCAGGAAGAACTGACAATGAGATTAAGAACTATTGGAGGACTCATTTCAAGAAGAAGGCGAAAAATTCTCCAGATTCTGCAGAAAAAGCGAAAAATCGCCTCATAAAGAGGCAACAATTTCAGCAGCAGCAACAGCAGCAACAACAGCAACTTCAATTCAACTTGGACATCAAAGGGATTATGGCTCTTCTGGAGGAAAATGATAACACCGTAACTATGCCTTGTTTGTCTCAAATGAGGCAAGAAATGTATCTGAATAACATAGAAGAACAAGGCTGCTTCTACTCTATGCTCAATGGCAATGTCTCTGCACCAGAACCTTCAAATAATGATGATACTTTCTGGGATGGTCTGTGGAACTTGGATGATTTTCATGGAAATTTCAGTGCAGCAAACAAAGCCAATCTACACAATTTAGTTGCTCCCTTCTGCTAG 762 0.4186 MGWGMNMIEEEGWRKGPWTAEEDRLLIEYVRLHGEGRWNSVSRLAEDDVCFMFSSETGLKRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHGRWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKNSPDSAEKAKNRLIKRQQFQQQQQQQQQQLQFNLDIKGIMALLEENDNTVTMPCLSQMRQEMYLNNIEEQGCFYSMLNGNVSAPEPSNNDDTFWDGLWNLDDFHGNFSAANKANLHNLVAPFC 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1676 253 Gene3D - 15 79 - -
Lele23g1676 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 129 IPR017930 -
Lele23g1676 253 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Lele23g1676 253 CDD SANT 84 125 IPR001005 -
Lele23g1676 253 FunFam MYB transcription factor 84 163 - -
Lele23g1676 253 Gene3D - 84 128 - -
Lele23g1676 253 ProSiteProfiles Myb-like domain profile. 10 74 IPR001005 -
Lele23g1676 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 74 IPR017930 -
Lele23g1676 253 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 9 187 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele23g1676 253 CDD SANT 17 74 IPR001005 -
Lele23g1676 253 FunFam Myb transcription factor 15 79 - -
Lele23g1676 253 SMART sant 14 76 IPR001005 -
Lele23g1676 253 SMART sant 79 127 IPR001005 -
Lele23g1676 253 Pfam Myb-like DNA-binding domain 80 124 IPR001005 -
Lele23g1676 253 Pfam Myb-like DNA-binding domain 15 74 IPR001005 -
Lele23g1676 253 SUPERFAMILY Homeodomain-like 12 121 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1676 Lele-ChrLele23 20726432 20727416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1676 10 253 MYB Transcription Factor Family AT3G24310 56.877 8.37e-85 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele23g1676 Myb_DNA-binding 6.2e-14 CL0123