Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1667 ATGAGAAGTGGTATGCGCACTAAGAAGACATATGGGTCCCATATCATCACTAACTCCACCTCCAGCAGCACCCTTTTCCCCTTCTTTCGTGCTTCTTTTCTTTCTCGTCCTTCAATACCATTTTGTCTTCCACACCTTGTTCCATCCTCCCATTCCCAAGCGAAACTCCTCGCAAATTTCTTCCCTTTTCACCTCATTCCCTCCTTCTCTCACAAACCCATCTCTGCATTTCCGCTATCTCTCTCTCTTGCTTCCATCTTCAGTCCTTCTTCTATGACTCTGGGTGTACTAGGTGGCGGTGGCGGCAATGGTCTCTCTTCTGGGGCTACCCCAAATGAGCCTGCTGTGTCAAATGCTAAGGTTCTGGGTCAAGAATGTTCATCATCGTACAAAGGTGAGGCTGAACTTGAACTAGGTTTGGGTCTGAGCCTCGGTGGTACGCGCGGTGGTGGTGGTAGGAAGGCCAAGCCTTCTTCTGCATGGGCCGAGTGTGGTCGTATTTTGACGGCTAAAGACTTCCCTTCTGGAGTCTCTCATGGACCTTCTGTTGCTGCTTCTCGTTTCTCAGATAGAGTCAGCACTGTGGGTGGTTCTGTTTCTGGCACTAAGAGAGCTGCTGACTCTGTTTCTCATGAAGCTGGATCTCCTACTGCTAACAGTCAAGTTGTTGGGTGGCCACCCATCAGGGCATATAGGATGAACAGCTTGATTAACCAAGCAAAGGCTCAGAGGGCTGAAGAAGATAAATCCGGCGCCGATAAGAATAATCTCGATGATGTTTCAGTTACTAAAACCGGGACTGTCAACAATACTGAGAAAAGGCATCTCGGATTTGTTAAGGTGAATATGGATGGAATCCGCATTGGGAGAAAAGTAGACTTGAATTCTCATTCAAGTTATGAGACTTTAGCCCAAACACTTGAAGAAATGTTTTTCAGCCCTGCTTCAGCTGCTAAATCTGCTGCCGGTACTGAGAAAGAGCCCGGAACGAAACTCTCTAAGCTTTTGGATCAAACATCTGAATTTGTGCTGACATATGAAGACAAAGAAGGTGATTGGATGCTTGTGGGAGATGTTCCTTGGAGGATGTTCCTCAGCTCAGTGAGAAGGCTCCGAATCATGAGAACATCTGAAGCCAATGGACTTGCTCCTAGATGTCGAGAGAAAAATGAGAGGCTAAGGATTAAACCAATTTAG 1197 0.4678 MRSGMRTKKTYGSHIITNSTSSSTLFPFFRASFLSRPSIPFCLPHLVPSSHSQAKLLANFFPFHLIPSFSHKPISAFPLSLSLASIFSPSSMTLGVLGGGGGNGLSSGATPNEPAVSNAKVLGQECSSSYKGEAELELGLGLSLGGTRGGGGRKAKPSSAWAECGRILTAKDFPSGVSHGPSVAASRFSDRVSTVGGSVSGTKRAADSVSHEAGSPTANSQVVGWPPIRAYRMNSLINQAKAQRAEEDKSGADKNNLDDVSVTKTGTVNNTEKRHLGFVKVNMDGIRIGRKVDLNSHSSYETLAQTLEEMFFSPASAAKSAAGTEKEPGTKLSKLLDQTSEFVLTYEDKEGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRCREKNERLRIKPI 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1667 398 FunFam Auxin-responsive protein 271 386 - -
Lele23g1667 398 MobiDBLite consensus disorder prediction 241 261 - -
Lele23g1667 398 Gene3D - 271 387 - -
Lele23g1667 398 ProSiteProfiles PB1 domain profile. 276 378 IPR000270 GO:0005515
Lele23g1667 398 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 135 381 IPR003311 GO:0005634|GO:0006355
Lele23g1667 398 SUPERFAMILY CAD & PB1 domains 278 374 - -
Lele23g1667 398 Pfam AUX/IAA family 166 385 IPR033389 -
Lele23g1667 398 MobiDBLite consensus disorder prediction 196 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1667 Lele-ChrLele23 20654768 20657128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1667 280 396 B3 DNA Binding Superfamily AT1G59750 33.051 6.70e-13 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele23g1667 AUX_IAA 9.1e-65 CL0072