Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1656 ATGCCGGTTAAGTTCTGCTCTCTCAAGATGCACACTTTGAAGGAGAAAGTCACCGACAAGCTATCTCGCCTCTTCGCCGATTCTGCGCAGAATACCCCTCCTCAGGGCAGCTCCTACTCTAAAGAGGGTAGATCTTGGTCTTCATATTTTTCCTATGCCATTCCTTCTGTCAGCTTCAGTGGATCCAGGACAAGCAACCAGCAATATGATCTTAAACCAATTCAAGTTACATATAATCATCTAGAGCCTCAAGATGATCCATCGGATGAGTACGTTGATTGTAGTCCAGTGTGTAAAAGCATGAATTTTTTGAAAGATAAAATTAAAGATGAAGATCAGGCTTCCGGAAGGACTAGTTGCTGCTCGGAAGTTTTTGAAGAAGCAAGTACACCACAAACTCCTAATTCTGCGAAGAAGCCCCGGGTCAATCTGACTGACGAGTCTATCTTTATTTCACCCGAGTTGTATGAATTTTTTGATTCCTGCCTCCCTAATATAGTTAAAGGGTGTCGATGGGTCTTACTTTATAGTACTTTGAAGCATGGAATATCACTTCGTACACTAATCCGCAAGAGTGCTGAACTTCCTGGTCCTGGATTGCTAATTGTAGGAGATAAGCAAGGTGCTGTTTTCGGCGGGTTGGTAGACTGTCCTTTAAAACCTACAGCTAAGCGAAAGTATCAAGGAACACACCAATCATTTGTCTTTACGACAATATATGGCGAACCAAGGTTGTTTCGGCCAACTGGTGCGAATCGTTACTACTACATGTGTTTGAATGACTTACTTGCACTTGGTGGAGGTGGTAATTTTGCTTTATGCTTGGATGGAGACCTGTTGAATGGAACTAGTGGACCCTGCGACACATTTGGAAGCTCATGCCTGGCTCATAGTCCAGAGTTTGAGTTAAAGAATGTTGAGTTCTGGGGTTTTACGCATGCTTCCCCTTACCTTACGCAAGTCTCTTCTTCTGCATTGTTCTCCCAACTCATAGCCATGGAGAGTTTTCTGGGACAATTAGCTGATCATATCCAGTTTCGCTCTGCTTTATTAGGGCGTAGAATTTACAGGATGTTGCAGGATGTCATCCTCGCGCCACCGCAACCGCCACCTCCTCCCCAGGCGGAGCAACTTACCAATATTGATGAAATCTCAAGCCCCATTAGTGCTCGACTTTTTGAGCTTTGTGATCCTGAATTGTTCCCAGAGGCTCTGCAGAATCCTGAGGTTACCTCCAGCTCAAACTGCTGCTATGAGGAGAATTCCTCCTATGCCCCAAATATATCTCTAGCTTTAGATGTAGACAATAAGTTCAACAATAGCAATACAATCATCACCACCCAAACTAGCACAAATCAGACCAGCACCGCCCCGGCTGCCCCTGCTGCCACCACTACCACCAACAACAACAATACAACCAACAGTACCAATCTGTCCATTATCTTTGACTCTCAAGATGAAATTGACAACGACATTTCTGCCTCCATAGACTTCTCCTCATCTCCTGCTTTTCCTGTCCCTCCATTTCTCCCAGTCGCAACTCAGCAGGATCAGCAATTTGATTTCTCTTCACTGCAGCCTCAGGTCACTACACTTGCCTCAAGTTCAGTTGTGGAATGCCTTGCACAATACGCCACAGACTCTGCTGTTGCACCTCTCATGGGGGCTTCGTTAGCTTCTGTTTTTGAAGATGATTGCTTATCTTCTGTCCATTCTTATGTTCCTTTGAACCCTTCATCTCCTTCTTGCTCTTATCTTAATCCTGCTGGCATAGGACCTTACATGCCTCTTGGTCCCCTTAATACTGTCTTATCTGCTGATAGTTCTGGGATATTTGGTGGGAGCATTCTTCTGGGTTCTGAACTGCAGGCACAAGAACTGGATTACCAGGGAGATAATGGTGGAATTTATTGTGCAGATTCAATTCAAAGGGTTTTCAACCCGCCAGACCTCCAGGCACTTAGTGCTGAGGGCCAGAAACTGGTAGCTGGGGTTGGGAGTTCCACCACTTTGACACCAGAGATATCAAACTTGGAGGATTCTACCTTCAAGGTTGGAAAGCTTTCTGTTGAACAGAGGAAAGAAAAGATTCATAGATACATGAAGAAAAGGAATGAGAGAAACTTCAGCAAGAAAATCAAGTATGCTTGTCGCAAAACTCTAGCAGATAGCCGGCCTCGGGTTAGAGGAAGGTTCGCAAAGAATGATGATTTTGGAGATACTCAAAGACCTGCTAGTAGCAATCATGAAGAAGATGATGAAGAAGACGTAGTTGTGAAGGAAGAAGATGATATGGTTGATTCCTCAGATATTTTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCCTGGATTTGA 2376 0.4432 MPVKFCSLKMHTLKEKVTDKLSRLFADSAQNTPPQGSSYSKEGRSWSSYFSYAIPSVSFSGSRTSNQQYDLKPIQVTYNHLEPQDDPSDEYVDCSPVCKSMNFLKDKIKDEDQASGRTSCCSEVFEEASTPQTPNSAKKPRVNLTDESIFISPELYEFFDSCLPNIVKGCRWVLLYSTLKHGISLRTLIRKSAELPGPGLLIVGDKQGAVFGGLVDCPLKPTAKRKYQGTHQSFVFTTIYGEPRLFRPTGANRYYYMCLNDLLALGGGGNFALCLDGDLLNGTSGPCDTFGSSCLAHSPEFELKNVEFWGFTHASPYLTQVSSSALFSQLIAMESFLGQLADHIQFRSALLGRRIYRMLQDVILAPPQPPPPPQAEQLTNIDEISSPISARLFELCDPELFPEALQNPEVTSSSNCCYEENSSYAPNISLALDVDNKFNNSNTIITTQTSTNQTSTAPAAPAATTTTNNNNTTNSTNLSIIFDSQDEIDNDISASIDFSSSPAFPVPPFLPVATQQDQQFDFSSLQPQVTTLASSSVVECLAQYATDSAVAPLMGASLASVFEDDCLSSVHSYVPLNPSSPSCSYLNPAGIGPYMPLGPLNTVLSADSSGIFGGSILLGSELQAQELDYQGDNGGIYCADSIQRVFNPPDLQALSAEGQKLVAGVGSSTTLTPEISNLEDSTFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTQRPASSNHEEDDEEDVVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1656 791 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 37 313 - -
Lele23g1656 791 MobiDBLite consensus disorder prediction 729 757 - -
Lele23g1656 791 ProSiteProfiles TLDc domain profile. 149 312 IPR006571 -
Lele23g1656 791 MobiDBLite consensus disorder prediction 450 473 - -
Lele23g1656 791 MobiDBLite consensus disorder prediction 729 750 - -
Lele23g1656 791 SMART 109ultra 148 312 IPR006571 -
Lele23g1656 791 Pfam CCT motif 693 735 IPR010402 GO:0005515
Lele23g1656 791 Pfam TLD 174 311 IPR006571 -
Lele23g1656 791 ProSiteProfiles CCT domain profile. 693 735 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1656 Lele-ChrLele23 20599960 20613335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1656 170 315 EF-hand Containing Proteins AT5G06260 28.205 4.52e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele23g1656 TLD 4.2e-29 No_clan