Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1616 ATGGAAGCTACAAGGTGCTGGTTTAATAAGTTCAAGTCAAAGGACAAAATGAAGTCTCCCAAGAACAAGGAATCTACAGCTGCTGTAAAAGAAGGGTCAAGACCACCAACAAATGAAGAAGCACCATCAAATGTGACCAAACAGAAGGCTGCTGCTGCAAAGCAGTACATAGAAAATCATTACAAGAAGCAGATGAAGAACCTGCAGGAGAGGCAGGAGAGACGTAATTTGCTAGAGAAAAAGCTGGCTGATGCCGAAGTCTCTGAAGAAGAGCAGAACAACTTGCTTAAGTATTTGGAGAAAAAGGAGACGGAATATATGCGCCTTCAAAGGCATAAGATGGGAGCTGATGATTTTGAGCCATTGACCATGATAGGGAAGGGTGCATTTGGAGAGGTTAGAGTCTGCCGAGAGAAGGCAACTGGTCATGTATATGCTATGAAGAAGCTCAAGAAATCTGAGATGCTTCGTAGGGGCCAGGTTGAACATGTAAAAGCTGAGAGGAACCTACTCGCAGAAGTTGACAGCAATTGCATAGTGAAACTTTACTGTTCCTTTCAAGATGAAGAGTATCTATATCTCATTATGGAGTATCTCCCTGGTGGTGATATGATGACTTTGCTGATGCGGAAGGATACTCTCACAGAAGATGAGGCCAGATTCTATGTTGGGGAGACTGTGCTAGCGATTGAATCAATTCATAAACACAATTACATTCATAGAGACATCAAGCCTGACAACTTGTTGCTAGATAGATACGGTCACATGAAATTATCAGATTTTGGATTATGCAAACCACTAGACTGCAGTAATCTTCAAGAAAAGGATTTTTCTGTTGGAAGCAATTTAAGTGGAGCCCTCAGGAGTGATGGACGTCCTGTAGCACCTAAACGTACTCAACAGGAACAGCTTCAGCATTGGCAGAAAAATAGACGGATGCTTGCCTATTCTACGGTTGGAACACCTGACTATATTGCCCCAGAAGTTCTTCTGAAGAAAGGATATGGGATGGAGTGTGATTGGTGGTCTCTGGGTGCTATAATGTATGAAATGCTTGTGGGGTATCCGCCCTTTTATTCAGATGAGCCGATGTCAACTTGTAGAAAGATAGTAAATTGGAGAACTCATTTAAAATTTCCAGAGGAGGCTAAGCTATCTGTAGAGGCAAAGGATCTTATATGCAGACTCTTATGTAATGTGGACCAGCGACTTGGCACTAAAGGGGCTGATGAAATAAAGGCTCACCCGTGGTTTAAGGGTATTGAATGGGACAAACTGTACCAAATGAAAGCTGCATTCATTCCTGAGGTCAATGATGAATTAGATACTCAAAATTTTGAGAAGTTTGAAGAGGTTGACAACCAAATTCAGCCTTCCTCAAAATCGGGACCATGGAGAAAGATGCTGTCATCTAAAGACATTAACTTTGTTGGATACACTTATAAGAACTTTGAGATCGTGAATGATCATCAACTACCCGGAATCGCTGAATTGAAGAAGAAGAGCACAAAACCTAAAAGACCATCTATTAAGACGCTGTTTGATGATGAGTCAACTATGGATGCCAAGCAACCAGCCCAAGGGAGCTTCTTAAACCTCCTACCTACTCAACCGGAAGTTCCGGAGAAAAGTGAATCACAATGA 1644 0.4197 MEATRCWFNKFKSKDKMKSPKNKESTAAVKEGSRPPTNEEAPSNVTKQKAAAAKQYIENHYKKQMKNLQERQERRNLLEKKLADAEVSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHMKLSDFGLCKPLDCSNLQEKDFSVGSNLSGALRSDGRPVAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSVEAKDLICRLLCNVDQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVDNQIQPSSKSGPWRKMLSSKDINFVGYTYKNFEIVNDHQLPGIAELKKKSTKPKRPSIKTLFDDESTMDAKQPAQGSFLNLLPTQPEVPEKSESQ 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1616 547 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1616 547 Gene3D Phosphorylase Kinase; domain 1 109 204 - -
Lele23g1616 547 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Lele23g1616 547 Coils Coil 61 88 - -
Lele23g1616 547 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lele23g1616 547 MobiDBLite consensus disorder prediction 11 28 - -
Lele23g1616 547 MobiDBLite consensus disorder prediction 522 547 - -
Lele23g1616 547 MobiDBLite consensus disorder prediction 499 547 - -
Lele23g1616 547 Gene3D Transferase(Phosphotransferase) domain 1 205 435 - -
Lele23g1616 547 MobiDBLite consensus disorder prediction 499 518 - -
Lele23g1616 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Lele23g1616 547 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele23g1616 547 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele23g1616 547 FunFam Non-specific serine/threonine protein kinase 90 202 - -
Lele23g1616 547 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1616 547 CDD STKc_NDR_like 117 482 - -
Lele23g1616 547 FunFam Non-specific serine/threonine protein kinase 203 270 - -
Lele23g1616 547 SUPERFAMILY Protein kinase-like (PK-like) 93 470 IPR011009 -
Lele23g1616 547 FunFam Non-specific serine/threonine protein kinase 317 436 - -
Lele23g1616 547 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 468 - -
Lele23g1616 547 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1616 547 MobiDBLite consensus disorder prediction 11 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1616 Lele-ChrLele23 20371518 20376349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1616 1 541 AGC Kinase Gene Family AT4G14350 84.104 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lele23g1616 Pkinase 8.8e-64 CL0016