Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1606 ATGGTGAGAGCTCCTTGCTGTGAGAAGATGGGACTGAAGAAGGGTCCTTGGACTCCCGAGGAAGACCAGCTCTTGGTCTCCTACATTCAAAAACATGGCCATGGCAATTGGCGAGCCCTCCCAAAGCAAGCTGGTCTTTTAAGATGTGGCAAGAGTTGCAGACTCCGCTGGATCAATTACTTAAGGCCAGATATAAAGAGAGGGAACTTCACGCCAGAAGAAGAAGAAACCATCGTTAAGCTCCATGAGATGCTTGGCAACAGGTGGTCAGCAATTGCAGCTAAATTACCAGGAAGAACAGACAACGAGATAAAAAATGTGTGGCATACCCACTTGAAGAAGAGGCTTCAGAAAACAACCATTTATTCAGATTCCAAAACCAGATCAACAGGCTCCAAACCTTCAATCAAACGATCTGTTTCCAATTCCAGCACGGTGACAGCTCAATCATCGGAACCTGGGAGTTTCATCGGTTCACCAGAAAAGGACACGACATCATCGTCAGTTTCAGCATCATGCACAACAACTTGTTCTAGTGATTGTGGGCAGAGCATGGCCATCAAGTGTGAAGACATAGATTCATCACTGGAGCCTTATGTATTGCCTCAGATTGATGAAAGCTTTTGGTCAGAAGCAGCAATGGATAATAATAGTGCTACCATTGAAAATGAATTACCAGTTCCTGAATACCCATTTGATTCTGTAGAATTATCGTCCCAACAAGGTTATGGGTATAATAATAATGGTTTGAACTTTGACGATGGAATGGATTTCTGGTACGAGGTATTCATCAGAACAGGGGATTTTACAGAGTTGACGTTCTGA 825 0.4364 MVRAPCCEKMGLKKGPWTPEEDQLLVSYIQKHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTPEEEETIVKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLQKTTIYSDSKTRSTGSKPSIKRSVSNSSTVTAQSSEPGSFIGSPEKDTTSSSVSASCTTTCSSDCGQSMAIKCEDIDSSLEPYVLPQIDESFWSEAAMDNNSATIENELPVPEYPFDSVELSSQQGYGYNNNGLNFDDGMDFWYEVFIRTGDFTELTF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1606 274 MobiDBLite consensus disorder prediction 122 171 - -
Lele23g1606 274 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Lele23g1606 274 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele23g1606 274 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele23g1606 274 MobiDBLite consensus disorder prediction 119 171 - -
Lele23g1606 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele23g1606 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele23g1606 274 Gene3D - 13 66 - -
Lele23g1606 274 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele23g1606 274 Gene3D - 68 143 - -
Lele23g1606 274 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele23g1606 274 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 220 - -
Lele23g1606 274 CDD SANT 16 61 IPR001005 -
Lele23g1606 274 FunFam MYB transcription factor 68 127 - -
Lele23g1606 274 FunFam MYB-related transcription factor 13 66 - -
Lele23g1606 274 SMART sant 66 114 IPR001005 -
Lele23g1606 274 SMART sant 13 63 IPR001005 -
Lele23g1606 274 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1606 Lele-ChrLele23 20312293 20313752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1606 1 272 MYB Transcription Factor Family AT2G31180 51.087 1.31e-83 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele23g1606 Myb_DNA-binding 3.2e-16 CL0123