Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1603 ATGTTAACTACATATATGCTAATTCCGCTCTTTTATTACAAAAAGATGAGCAAAGACCTGCAACGAGAATTTGTCGTATTAATGGAGCTGGAACGGGGCCGATTCGGCACCGTCTATAAGTGCGCTTCCCGGAGCAACGCCGACGAATTCTTCGCCGTCAAATCCATCGACAAACTTGTGGTCGGGGCCGGCGACTTTCTGGACGCCCAGTGCCTCTCCAACGAGGCAAAGATCGTTCAGCTTCTCCACCATCACCCCAACATCGTCACCCTCCACGAGGTCTACGAGGACGAAACCCACCTCCACATGCTCTTCGAACTCTGCGACGACGCCGATCTCCACCGCCGTCTCCGAGGCACTATTGTTATTCCCGAATCAGAGGCCTCTCGGATAATGCGTCAGCTCATGCAAGCCGTTTCCCACTGCCACCGCCTCGGCGTGGCTCACCGAGACATCAAGCCCGAGAACATACTGTTCGTGGGCCAGCGCGGGTTGCTTAAGCTGGCGGACTTCGGGTCGGCTGAGTTTTTCAAGGAGGGGGAGCTGATGAGCGGGGTGGTTGGGACACCGTACTACGTGGCGCCGGAGGTGGTGGCCGGCAGGGAGTACAATGAGAAAGTGGACGTGTGGAGCAGCGGAGTGATATTATACATGATGTTATCAGGTGTCCCGCCGTTCGACGGAGAAACCGAGGTGGAGATTTTTCAGGCGGTGCTCAGAGGGAACTTAAGATTCCCTAGACAGTATTTTCAGTCGGTGTCGCGAGAGGCCAAGGATCTGCTCAGAAGAATGCTGTGTAAAGACGTTTTTAGAAGGTTATCGGCTGAGGAAGTTCTGAGGCATCCTTGGTTCACCATTGCAGAAGGCACCAAGAACGGAAATTGGCTGTGTAGGAAAACAAAAGGGAACCGATTTGATTCGAGGAGACAAAAAACTAATATGTGGGGGAAAATGGGCACAAACCACAGCAAGTTTTCTCACATTTGTTCCATAATTATATATGAAAGTCTTGGACACTGTAACAGTAATACGAGGAACTTAAACGGCTAG 1050 0.5162 MLTTYMLIPLFYYKKMSKDLQREFVVLMELERGRFGTVYKCASRSNADEFFAVKSIDKLVVGAGDFLDAQCLSNEAKIVQLLHHHPNIVTLHEVYEDETHLHMLFELCDDADLHRRLRGTIVIPESEASRIMRQLMQAVSHCHRLGVAHRDIKPENILFVGQRGLLKLADFGSAEFFKEGELMSGVVGTPYYVAPEVVAGREYNEKVDVWSSGVILYMMLSGVPPFDGETEVEIFQAVLRGNLRFPRQYFQSVSREAKDLLRRMLCKDVFRRLSAEEVLRHPWFTIAEGTKNGNWLCRKTKGNRFDSRRQKTNMWGKMGTNHSKFSHICSIIIYESLGHCNSNTRNLNG 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1603 349 Gene3D Transferase(Phosphotransferase) domain 1 114 328 - -
Lele23g1603 349 ProSiteProfiles Protein kinase domain profile. 24 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1603 349 FunFam Maternal embryonic leucine zipper kinase 15 307 - -
Lele23g1603 349 Pfam Protein kinase domain 27 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1603 349 Gene3D Phosphorylase Kinase; domain 1 26 113 - -
Lele23g1603 349 PANTHER SERINE/THREONINE-PROTEIN KINASE 17 292 - -
Lele23g1603 349 SMART serkin_6 24 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1603 349 CDD STKc_CAMK 24 283 - -
Lele23g1603 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Lele23g1603 349 SUPERFAMILY Protein kinase-like (PK-like) 7 285 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1603 Lele-ChrLele23 20283417 20288933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1603 18 292 EF-hand Containing Proteins AT3G57530 42.599 8.15e-71 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele23g1603 Pkinase 1.5e-71 CL0016