Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1599 ATGGACCGTGGGGTTCTCGATTCTGTGATCAATAGGCTTCTTGAAGTCAGAGGGACACCTGGGAAGCTGGTGAATCTCGCAGAAACAGAAATCAGGCAGCTCTGTTTTGTCTCCAGGGATATATTCTTGAGGCAGCCCAATCTGCTGGAACTTGAAGCTCCAATTAAGATCTGTGGAGACATTCATGGTCAATATCCTGACCTGCTGAGACTTCTTGATCATGGTGGATTACCCCCTCGCTCCAATTACTTGTTCTTAGGGGATTACGTGGATCGCGGCAAGCAAAGTCTGGAGGCAATTTGTCTTCTTCTTGCCTACAAAATAAAGTACCCTGATAACTTTTTCCTTCTGAGGGGCAATCACGAATGTGCTTCTATCAACCGTATCTATGGATTCTATGATGAATGTAAGCAAAGATACAACGTCAGGCTCTGGAAAATATTCACAGATTGTTTCAACTGCTTGCCCGTGGCGGCTCTTATCGACGAAAAAATTCTATGCATGCACGGTGGACTCTCCCCTGAGTTGTACAACTTAAAGCAGATTAGGACTTTACCTCGTCCTTGTGAAGTACCTGAATCTGGTCTGCTATGTGATCTCCTCTGGTCTGATCCTTCTAAAGATATCTACGGTTGGGGAGCGAACGAACGCGGCGTTTCGTATACTTTTGGTGCTGATAGGGTGACAGAGTTTCTTCGAAAAAATGATCTGGACTTAATCTGTAGAGCTCACCAGGTTGTGGAAGATGGATATGAGTTCTTCGCTAATAGACAGCTTGTAACTGTGTTCTCAGCACCAAATTACTGTGGAGAGTTTGACAATGCTGGTGCCATGATGACTGTTGATGATACACTTATGTGCTCTTTCCAAATTTTAAGGCCTATGGAGAAAAAACCTAGGTTTGGCTTTGGAAGCACAACTACAGTCAAACCTAGTACTCCAACTAAAATCAAGGCATTTCTTGGTGTGTAG 972 0.4414 MDRGVLDSVINRLLEVRGTPGKLVNLAETEIRQLCFVSRDIFLRQPNLLELEAPIKICGDIHGQYPDLLRLLDHGGLPPRSNYLFLGDYVDRGKQSLEAICLLLAYKIKYPDNFFLLRGNHECASINRIYGFYDECKQRYNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELYNLKQIRTLPRPCEVPESGLLCDLLWSDPSKDIYGWGANERGVSYTFGADRVTEFLRKNDLDLICRAHQVVEDGYEFFANRQLVTVFSAPNYCGEFDNAGAMMTVDDTLMCSFQILRPMEKKPRFGFGSTTTVKPSTPTKIKAFLGV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1599 323 SMART pp2a_7 26 296 IPR006186 GO:0016787
Lele23g1599 323 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Lele23g1599 323 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 10 298 - -
Lele23g1599 323 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Lele23g1599 323 Gene3D - 2 305 IPR029052 -
Lele23g1599 323 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Lele23g1599 323 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Lele23g1599 323 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Lele23g1599 323 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Lele23g1599 323 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Lele23g1599 323 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Lele23g1599 323 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Lele23g1599 323 FunFam Serine/threonine-protein phosphatase 1 302 - -
Lele23g1599 323 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Lele23g1599 323 SUPERFAMILY Metallo-dependent phosphatases 20 298 IPR029052 -
Lele23g1599 323 CDD MPP_PP1_PPKL 5 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1599 Lele-ChrLele23 20266111 20267642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1599 20 239 Calmodulin-binding Proteins AT5G63870 31.679 1.45e-28 110