Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1586 ATGGCATTTATTGTTGGAAATATTCTACTTGTACTACTGAAAAGTAATAATTATTACAGGTGAAAAAGGAAAAACAACAAGCATGAGGGAGGTGATTCTCCAAACAACGGCGCGATTTCTGAGAACTCGAACGAATCGTCAATGGATTTGCTAGAAGGTGGTAGCGGCTGGGATTTCCTCGATTACGGCTTGATCGACGATACACCGCCGGCGCCCACCGATTTTCTGTGGTACAATCAGAGCGAGAGCTCGGGAATTGGCTTTTCAGGTGGTGCTATTGTTCCTCAAGAGAACGCCCGGAAGAGAGGACGCCCCAATTTATCTAGCAATCCAGGACCAAAAGCTTGTCGTGAGAAAATGCGGAGGGAGAAACTGAATGACAGATTTTGTGACTTGAGCTCTGTTCTGGAGCCTGGGAGACCTGTGAAGACTGATAAATCAGCTATACTTGATGATGCCATCAGAATCTTGAATCAACTTAAAAATGAAGCTCAGGAGCTTAAAGAAACAAATGAGAAGTTGTTAGAGGAAATAAAATGGTTGAAGGCAGAGAAACATGAACTTCGTGAAGAGAAAATTGTTCTGAAAACGGATAAAGAAAGGATTGAGACGCAGTTAAAAGCAGTGCCTGTTTCACCTGCAGGATTTATGCCTCCCCATGCAGCTGCTTATCAAGCTGGGGTCAACAAAATGGCTGTTTACCCAAGCTATGGTTATTACCCCATGTGGCAATATATGCCAACGTCAGCTCGAGATACATCGCAGGATCATGAACTCAGGCCTCCAGCTGCTTAG 795 0.4428 MAFIVGNILLVLLKSNNYYRXKRKNNKHEGGDSPNNGAISENSNESSMDLLEGGSGWDFLDYGLIDDTPPAPTDFLWYNQSESSGIGFSGGAIVPQENARKRGRPNLSSNPGPKACREKMRREKLNDRFCDLSSVLEPGRPVKTDKSAILDDAIRILNQLKNEAQELKETNEKLLEEIKWLKAEKHELREEKIVLKTDKERIETQLKAVPVSPAGFMPPHAAAYQAGVNKMAVYPSYGYYPMWQYMPTSARDTSQDHELRPPAA 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1586 264 CDD bHLH_AtILR3_like 114 189 - -
Lele23g1586 264 Pfam Helix-loop-helix DNA-binding domain 115 160 IPR011598 GO:0046983
Lele23g1586 264 Coils Coil 150 205 - -
Lele23g1586 264 MobiDBLite consensus disorder prediction 22 52 - -
Lele23g1586 264 Gene3D - 114 193 IPR036638 GO:0046983
Lele23g1586 264 SMART finulus 115 166 IPR011598 GO:0046983
Lele23g1586 264 PANTHER BHLH TRANSCRIPTION FACTOR 55 264 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Lele23g1586 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 116 184 IPR036638 GO:0046983
Lele23g1586 264 MobiDBLite consensus disorder prediction 31 50 - -
Lele23g1586 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 109 160 IPR011598 GO:0046983
Lele23g1586 264 FunFam Transcription factor bHLH104 112 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1586 Lele-ChrLele23 20167838 20172055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1586 87 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 64.865 4.62e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele23g1586 HLH 3e-08 No_clan