Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1582 ATGACTAGTTCAGAGAATTACTCGAGCGAAGAAACTGACCAGCTAGAAGATGCAGATTCAGGAGGAACCAGACGCTCTTACGAGTGCACATTTTGCAGAAGGGGCTTCACCAACGCTCAGGCGTTAGGGGGTCACATGAATATTCATAGAAAAGACAGAGCCAAGGCCAAACAAAGCACACCTAATTCTTCTTGTTTGCTTTCAAACAAATTGTCAAATGAGGAGTCCTTTGCATCAGCCTCCCCTTTTCTTTCAGAAATATCTTCAGGCCAACAATCCTCAAGGTTTTACTCCATTTTCGAGGTTCAGGGAAACTACAACATGTATTTCCAGTCATCTTCGACTGCAACAAACCCTAGAAACCCTTCTCCTGCATCATATGCCTTTCCCTTTGAGTATCTTAATCCAAGGACTCATCGTCAGTCTGTGGATATGAACCAAGAGCTTCTAGGGGCCAATTTGAGTCTCCAGATTGGTCCGAGTCATCATGTGGAAACTACTCAGAAAGATGGCGAAGTGGATTTAGAGCTCAGACTTGGCCATCATCCACATTGA 555 0.4432 MTSSENYSSEETDQLEDADSGGTRRSYECTFCRRGFTNAQALGGHMNIHRKDRAKAKQSTPNSSCLLSNKLSNEESFASASPFLSEISSGQQSSRFYSIFEVQGNYNMYFQSSSTATNPRNPSPASYAFPFEYLNPRTHRQSVDMNQELLGANLSLQIGPSHHVETTQKDGEVDLELRLGHHPH 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1582 184 MobiDBLite consensus disorder prediction 1 24 - -
Lele23g1582 184 MobiDBLite consensus disorder prediction 165 184 - -
Lele23g1582 184 Gene3D Classic Zinc Finger 6 82 - -
Lele23g1582 184 ProSitePatterns Zinc finger C2H2 type domain signature. 29 49 IPR013087 -
Lele23g1582 184 SUPERFAMILY beta-beta-alpha zinc fingers 24 53 IPR036236 -
Lele23g1582 184 ProSiteProfiles Zinc finger C2H2 type domain profile. 27 54 IPR013087 -
Lele23g1582 184 PANTHER OS07G0101800 PROTEIN 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1582 Lele-ChrLele23 20128422 20128976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1582 19 58 C2H2 Transcription Factor Family AT3G09290 72.500 1.28e-15 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele23g1582 None None None