Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1581 ATGTTAAGAAGGGTAGTATCAGGACTTTTGATTTCCTCGCTCCTTATGTGTGTGTCTGCATCGGATAATGAATTCCCCAGATGTAACTGTGATGATGAGGCCAACCTGTGGACTATTGAGGGCATTCTGGAGTGCCAGAGAGTCAGTGATTTCCTGATTGCTGTGGCCTATTTTTCCATCCCAATAGAACTGCTTTACTTCATCAGTTGCTCCAACGTCCCATTCAAATGGGTGCTTTTTCAATTCATTGCCTTCATTGTACTATGTGGAATGACACACATGCTAAATGGCTGGACTTATGGTCCCCACTCATTCCAACTCATGGTGGCACTTACTGTCTTCAAAATTCTCACTGCCTTGGTATCATGTGCCACTGCCATTACGCTCATTACTCTGATTCCCTTGCTTCTCAAAGTGAAGGTCAGAGAATTCATGCTGAAGAAAAAGACTTGGGATCTTGGGCGAGAGGTTGGTCTTATAATGAAACAAAAGGAGGCTGCAAGGCATGTAAGAATGCTTACCCAGGAGATTCGTAAGTCACTTGATAGGCATACAATTCTGTATACCACCCTGGTTGAGCTGTCTAAAACGCTGGGTTTACAGAATTGTGCAGTTTGGATGCCTAATGTTGATAAATCAGAAATGAACCTTACTCATGAATTAAATGGGAGGAATTTAAATTTCTCTGTACCTATTACTGATCCAGATGTTGTAAAAATCAAAGGAAGTGATGGCATAAATATTCTTAGCCCTGACTCAGCTCTTGCTGCCGCCAGCAGTGGAGTTTCAGATGAGGTAGGACCCCTAGCCGCTATTCGAATGCCAATGCTTGGGGTTTGCAATTTTAAAAGGGGGACACCTGAACTAACTGAGGCTTGCTATGCAATACTGGTTTTAATTCTTCCTGGCGGAGAACCTAGATCTTGGAGTGATTATGAGCTAGAGATTATTAAGGTGGTAGCTGATCAGGTAGCTGTAGCTCTATCTCATGCTGCAATTCTTGAAGAGTCCCAACTTATGAGAGAGAAGTTGGAGGAGCAAAACCGAGCTTTGCAACAAGCAAAAACGAATGCAATGATGGCGAGTCAGGCAAGAAACTCATTTCAGAAGGTCATGGGGGATGGAATGAGAAGGCCAATGTACTCAATTTTGGGCTTGCTGTCAATGATGGGAGATGAGAATTTGAAAAGTGAACAAAAACTCATTGTGGATGCCATGTTTAGGACCAGTAACGTTCTTTCGAACCTCATTAATGATGCCATGGATATTTCTGTGAAGGATGATGGAAGGTTTCCGGTGGAGATGAGATCTTTTGGCTTACATGCCCTGATAAAAGAGGCAGCTTGCCTTGCCAAGTGCATGTGTGTCTATAAGGGTTTTGGTTTTATGGTGGAGGTCGACAGGTCGTTGCCTGACAATGTCATGGGTGATGAGAGGAGGGTCTTTCAGGTGATTTTGCATATGGTTGGGAACCTACTGGATGGTAACCATGGGGGAGGGGTTCTTGTACTTCGGGTTATTGCAGAAAGTGGAAGTCTGGGAAGGAATGAACAGGGGTGGACAACCTGGAGACCAAGTTCGTCTAGCGGGGATGTATATATTAGATTTGAGATAGGGATCAAAATCAGTAATTCTGAATTGGAGAACTCATTTTCTTTAGGACAGCTTGGTGGTAGGAAGTATGCCAGTGGCAGTGATAGAGGTGAGGGCAGATTGAGCTTCAGCGTTTGCAAGAGGGTAGCTCAGATGATGCAAGGGAACATATGGTTACTATCAAATACTCAAGGTTTTCCTCAAAGCATGGCCCTTGTTCTTCGGTTTCAATTGCGATCTTCTATAGCTATATCCATCTCTGAACCGGGAGAATCTTCGGAGCTTACAAATTCTAATTCTTTGTTCAGAGGCATGCATGTCTTGTTGGCCGAAAGTGATGATGTAAATAGAGCGGTGACCCAAAAATTGCTCCAGAAGCTTGGTTGCGTGGTAACTTCTGTTTCTTCAGGCTTCGAATGCCTCGCTGTCATTGGACCGGCTGGGTCCTCTATACAAGTTATTCTTTTGGATCTTCATATGCCTGAGTTAGATGGCTTTGAAGTTGCCACTAGGATTCGGAAGTATAGAAGCCGAAACTGGCCCGTGATCGTCGCTTTGACTGCGAGTGGAGATGATGATCTGTGGGAAAGATGTGTTCAAACCGGCATTAACGGAGTCATCCGGAAGCCAGTTTTGTTGCAAGGAATTGCCAGCGAGCTTAGGAGAATCCTGGTGCCGAGAAGCTAG 2280 0.4439 MLRRVVSGLLISSLLMCVSASDNEFPRCNCDDEANLWTIEGILECQRVSDFLIAVAYFSIPIELLYFISCSNVPFKWVLFQFIAFIVLCGMTHMLNGWTYGPHSFQLMVALTVFKILTALVSCATAITLITLIPLLLKVKVREFMLKKKTWDLGREVGLIMKQKEAARHVRMLTQEIRKSLDRHTILYTTLVELSKTLGLQNCAVWMPNVDKSEMNLTHELNGRNLNFSVPITDPDVVKIKGSDGINILSPDSALAAASSGVSDEVGPLAAIRMPMLGVCNFKRGTPELTEACYAILVLILPGGEPRSWSDYELEIIKVVADQVAVALSHAAILEESQLMREKLEEQNRALQQAKTNAMMASQARNSFQKVMGDGMRRPMYSILGLLSMMGDENLKSEQKLIVDAMFRTSNVLSNLINDAMDISVKDDGRFPVEMRSFGLHALIKEAACLAKCMCVYKGFGFMVEVDRSLPDNVMGDERRVFQVILHMVGNLLDGNHGGGVLVLRVIAESGSLGRNEQGWTTWRPSSSSGDVYIRFEIGIKISNSELENSFSLGQLGGRKYASGSDRGEGRLSFSVCKRVAQMMQGNIWLLSNTQGFPQSMALVLRFQLRSSIAISISEPGESSELTNSNSLFRGMHVLLAESDDVNRAVTQKLLQKLGCVVTSVSSGFECLAVIGPAGSSIQVILLDLHMPELDGFEVATRIRKYRSRNWPVIVALTASGDDDLWERCVQTGINGVIRKPVLLQGIASELRRILVPRS 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1581 759 CDD HATPase_ETR2_ERS2-EIN4-like 470 605 - -
Lele23g1581 759 Gene3D - 636 759 - -
Lele23g1581 759 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 24 755 - -
Lele23g1581 759 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 418 595 IPR036890 -
Lele23g1581 759 SUPERFAMILY GAF domain-like 185 331 - -
Lele23g1581 759 Coils Coil 334 364 - -
Lele23g1581 759 Gene3D - 168 335 IPR029016 -
Lele23g1581 759 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 349 429 IPR036097 GO:0000155|GO:0007165
Lele23g1581 759 SMART gaf_1 182 338 IPR003018 GO:0005515
Lele23g1581 759 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 593 IPR003594 -
Lele23g1581 759 Pfam GAF domain 182 328 IPR003018 GO:0005515
Lele23g1581 759 FunFam Ethylene receptor 634 758 - -
Lele23g1581 759 Gene3D - 336 429 - -
Lele23g1581 759 Pfam Response regulator receiver domain 638 745 IPR001789 GO:0000160
Lele23g1581 759 SMART REC_2 636 755 IPR001789 GO:0000160
Lele23g1581 759 PIRSF Ethylen_sen_hybr_HK 1 759 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Lele23g1581 759 CDD HisKA 362 424 IPR003661 GO:0000155|GO:0007165
Lele23g1581 759 CDD REC_ETR-like 638 751 - -
Lele23g1581 759 ProSiteProfiles Response regulatory domain profile. 637 755 IPR001789 GO:0000160
Lele23g1581 759 SMART HisKA_10 364 429 IPR003661 GO:0000155|GO:0007165
Lele23g1581 759 SUPERFAMILY CheY-like 633 754 IPR011006 -
Lele23g1581 759 FunFam Ethylene receptor 4 331 425 - -
Lele23g1581 759 Gene3D - 430 609 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1581 Lele-ChrLele23 20110708 20113528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1581 20 755 Miscellaneous Gene Families AT3G04580 58.501 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele23g1581 HATPase_c 3.8e-08 CL0025