Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1580 ATGGTATGCGTGGGGTTGCCGGGAGTAGAGCCGGCAGCCAACTCCCCCCTCAACAAGCGCCACACCGATCTTTCCATTAACGATAGCAGCGGTGGGAGCGGCAACCGAGAAGACGATGAAGAAAGAGAAAACGGAGACGAGCCCAAAGAGGGTGCAGTCGATGTCGGAACCCGCCGGCCCAGGGGCCGACCTCCCGGCTCCAAAAACAAACCCAAGCCGCCCATCTTTGTCACCCGAGATAGTCCCAACGCCCTAAGAAGCCACGTGATGGAAGTTGCCGGTGGAGCCGACGTTGCAGAGAGTGTGGCCCAATTCGCAAGGAGGCGTCAGCGTGGCGTTTGTGTTCTCAGTGGGAGCGGCTCCGTCGCCAACGTCACTCTCCGTCAACCCGCTGCCCCTGGAGCTGTTGTGGCCCTCCATGGTAGGTTTGAAATTCTATCCCTAACAGGTGCGTTCTTGCCGGGACCCGCTCCTCCCGGCGCGACGGGGCTCACGGTGTATCTCGCAGGAGGACAAGGGCAGGTCGTCGGAGGAAGTGTGGTCGGGTCTCTAGTAGCGGCCGGACCAGTGATGGTCATTGCTGCGACTTTTGCTAATGCGACTTACGAAAGACTACCACTTGATGATGATGATGAGGGAGCCAGCGCCGCGGCTCAAGGAGGAGGAGCAGGAGGGTCACCGCGGGGAATCGGTAGCAGCGGTGGCCAGTCTCTGCCGGCGGGACTTCCGGATCCGTCGTCCCTGCCTTTGTACAATCTGCCGCCGAATCTGATGCCCAACGGTGGTGGAGGGCAGGTGGGTCATGAAGCTTTTGCTTGGGCTCAGGGAAGACCACCTTACTGA 843 0.605 MVCVGLPGVEPAANSPLNKRHTDLSINDSSGGSGNREDDEERENGDEPKEGAVDVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDDDEGASAAAQGGGAGGSPRGIGSSGGQSLPAGLPDPSSLPLYNLPPNLMPNGGGGQVGHEAFAWAQGRPPY 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1580 280 PIRSF ESCAROLA 9 280 IPR014476 GO:0003680
Lele23g1580 280 ProSiteProfiles PPC domain profile profile. 82 220 IPR005175 -
Lele23g1580 280 CDD DUF296 86 169 IPR005175 -
Lele23g1580 280 Pfam Plants and Prokaryotes Conserved (PCC) domain 86 198 IPR005175 -
Lele23g1580 280 MobiDBLite consensus disorder prediction 18 32 - -
Lele23g1580 280 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 31 275 IPR014476 GO:0003680
Lele23g1580 280 MobiDBLite consensus disorder prediction 210 280 - -
Lele23g1580 280 MobiDBLite consensus disorder prediction 1 82 - -
Lele23g1580 280 SUPERFAMILY AF0104/ALDC/Ptd012-like 82 210 - -
Lele23g1580 280 FunFam AT-hook motif nuclear-localized protein 85 212 - -
Lele23g1580 280 Gene3D - 85 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1580 Lele-ChrLele23 20097708 20099436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1580 18 280 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 64.151 1.74e-99 291