Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1549 ATGGAGTCTGGAGCCGTATCGGCATCAGAGATCGCGGCAAAGTTGAATCTGCAGCCTCACCCCGAAGGTGGATTTTTCGCCGAGACTTTCCGTGACGGTTCCGTTCAACTTGTCAAGTCTCAGCTCCCACCCGAATATAAAGTTGACCGCCCGGTGTCTACTTGCATATACTTTCTGCTTCCGTCGGGGAGTGTTTCTCGCCTGCATCGTATACCCTGTGCTGAAACCTGGCATCATTACATAGGAGAACCTCTTACGGTAGTGGAAATAAATGATAAAGATGGAAGTGTCAAGTTCACCTGCCTTGGATCTAATCTGTCCGATAATCAGAAACCACAGTACACAGTGCCTCCCAATGTGTGGTTTGGTTCATTCCCCACAAAGGATTTTGATATATCGCCAGATGGGTCTGTGCAAAGAACTCCAACTAGAGATCGTGAGAGCCATTACTCCCTAGTAGGTTGCACTTGTGCCCCTGCCTTTCAGTTCCAAGATTTTGAGCTGGGAAAACGTTCTGACCTCATTTCTCAATTTCCCCACTTGGAGTCTCTCATCAGTGCTCTCACCTATCCTGATGATTCCTCAGCTAGTCACTGA 597 0.4807 MESGAVSASEIAAKLNLQPHPEGGFFAETFRDGSVQLVKSQLPPEYKVDRPVSTCIYFLLPSGSVSRLHRIPCAETWHHYIGEPLTVVEINDKDGSVKFTCLGSNLSDNQKPQYTVPPNVWFGSFPTKDFDISPDGSVQRTPTRDRESHYSLVGCTCAPAFQFQDFELGKRSDLISQFPHLESLISALTYPDDSSASH 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1549 198 Gene3D Jelly Rolls 1 190 IPR014710 -
Lele23g1549 198 SUPERFAMILY RmlC-like cupins 5 190 IPR011051 -
Lele23g1549 198 CDD cupin_YML079wp 8 184 IPR009327 -
Lele23g1549 198 Pfam Cupin superfamily (DUF985) 10 168 IPR009327 -
Lele23g1549 198 PANTHER RMLC-LIKE JELLY ROLL FOLD PROTEIN 4 192 IPR039935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1549 Lele-ChrLele23 19863756 19865200 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1549 23 19863756 19865200 Lele23g1549 23 19863756 19865200 ECH
Lele21g0500 21 3274532 3275978 Lele23g1549 23 19863756 19865200 hybridization
Lele22g0515 22 3275024 3276484 Lele23g1549 23 19863756 19865200 hybridization