Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1548 ATGGCCGCTGTTCGACACCCCATTTTCTTCTCCTTCTTCCTCCTCCTCCTCCTCACTCTTCCTTCCTCATCTTCTTCTTCCGACACCGATGCCCTCCTCAAACTCAAGCAGTCACTCACCAATTCTGCTTCTCTTTCTTCCTGGGTCCCCAATTCTCTCCCCTGCCGATGGCCCGGAATCATGTGCTACAACAACACCGTCATGGGTCTTCACCTTGCCGACATGGGTCTTTCCGGCAAGGTCGACATTGACGCTATGTTGGAGATTAAAGGCCTTCGAACCGTCAGCTTAGTGAACAACTCCTTCTCGGGTCCTATCCCAGAGTTCAACAGAATCGGCGCTCTCAAGGCTTTATACCTCTCCTCCAACCAATTTTCAGGGGAGATTTCATCAGATTTCTTCTCCTCTTTGAACTCGTTGAAGAAAATCTGGTTTGATGAGAACAAATTCTCCGGAACCATCCCCGATTCCATATCTCAGCTGAACAATCTCATAGAGATTCACCTCGAGAACAATGAATTCTCCGGACCCATCCCGCATCTAAAGCAGAGGATCAGATCGCTGGACATGTCCAACAACAAACTTGAAGGTCCAATCCCAGAGAGCTTGACAAAATTCGGGGCTAATTCCTTCCAGGGAAACGAGGGGCTATGCGGGAAACCTCTAGATAAGGCGTGCGACCAGAAGGGTACTGAAAGTAAGAATTCTTCCGGCAACGTCATGCTGATCATTCTCTCCATCGCCTGCTTGATCATCGCAATCGCGCTGTTCATAGTGGTTAGGTCAAGGCGCCATCTAGACGGCGACTTCAGCGTGCTGAACAGAGACAGCATAGACGAGGTGCAAGTGCACGTGCCGAGCTCGTCCGAAAGCAGAGATTCGGAATCGAGCCGGAGAGGGACGGGTTCGAAGAGGGGTGCGACGAAGAGCGGGAGTGCGGACCTGGTGGTGGTGAATGAGGAAAAGGGCGTGTTTGGGTTGCAGGATTTAATGAAGGCGGCCGCGGAGGTTCTGGGAAACGGAGGTATGGGATCGGCATATAAGGCGGGCATGGCGAGTGGATTGAGCGTGGTAGTGAAGAGGGTGAGAGCGATCAATCAGATAGGCAGAGATTATTTCGACGCCGAGATGAGAGGCTTTGGGAGAATCAAACATGCCAACATCTTGACCATTCTGGCTTACCATTTTCGCAAAGAGGAGAAGCTCATCATCTCAGAATACATGCCCAACGGCAGCTTGTTATATGTTTTGCATGGTGATCGAGGTTCATCTCATGCGGATCTGACCTGGCCCGTTCGTTTCAAGATAATCAAGGGAATTGCACAGGGGCTTCGATTCCTTCATTCTCATTTCTCTTCATACGATCTTCCCCACGGCAACCTGAAATCCAGCAATGTCCTCCTAACAAAGGATTACCAGCCACTCCTCTCTGATTACGCCTTACATCCGCTTCTCAACCCCAATTCTTTCAACGCTTTGTTCGCCTTCAAATCCCCAGATTACGTGCAGTACCAGGTAGTTTCCCAGAAAACCGACGTCTACTGCCTCGGAATCATCATCATCGAGATCATCACCGGCAAATTCCCTTCTCAGTATCATAGCAACGGCAAGGGCGGCACCGATGTCGTGCAATGGGTGCTCGCTGCAATTTCTGAGAGAAGAGAAGCCGAAGTGCTTGATCCCGAAATCGCAAACACCCCTGGCTCCTTAGATCAAATGCTGCAAATTCTCCAAGTCGGAGCCGCTTGCACCGAAAGTAACCCCGAACAACGAATTAACTTGAGTGAAGCCATTAGGAGGATAGAGGAGGTACGAGCCTAA 1821 0.5041 MAAVRHPIFFSFFLLLLLTLPSSSSSSDTDALLKLKQSLTNSASLSSWVPNSLPCRWPGIMCYNNTVMGLHLADMGLSGKVDIDAMLEIKGLRTVSLVNNSFSGPIPEFNRIGALKALYLSSNQFSGEISSDFFSSLNSLKKIWFDENKFSGTIPDSISQLNNLIEIHLENNEFSGPIPHLKQRIRSLDMSNNKLEGPIPESLTKFGANSFQGNEGLCGKPLDKACDQKGTESKNSSGNVMLIILSIACLIIAIALFIVVRSRRHLDGDFSVLNRDSIDEVQVHVPSSSESRDSESSRRGTGSKRGATKSGSADLVVVNEEKGVFGLQDLMKAAAEVLGNGGMGSAYKAGMASGLSVVVKRVRAINQIGRDYFDAEMRGFGRIKHANILTILAYHFRKEEKLIISEYMPNGSLLYVLHGDRGSSHADLTWPVRFKIIKGIAQGLRFLHSHFSSYDLPHGNLKSSNVLLTKDYQPLLSDYALHPLLNPNSFNALFAFKSPDYVQYQVVSQKTDVYCLGIIIIEIITGKFPSQYHSNGKGGTDVVQWVLAAISERREAEVLDPEIANTPGSLDQMLQILQVGAACTESNPEQRINLSEAIRRIEEVRA 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1548 606 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 605 - -
Lele23g1548 606 Gene3D Transferase(Phosphotransferase) domain 1 408 606 - -
Lele23g1548 606 SUPERFAMILY Protein kinase-like (PK-like) 336 601 IPR011009 -
Lele23g1548 606 Pfam Leucine Rich Repeat 185 205 IPR001611 GO:0005515
Lele23g1548 606 Gene3D Ribonuclease Inhibitor 185 224 IPR032675 -
Lele23g1548 606 Gene3D Phosphorylase Kinase; domain 1 299 407 - -
Lele23g1548 606 Pfam Leucine rich repeat 115 173 IPR001611 GO:0005515
Lele23g1548 606 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Lele23g1548 606 ProSiteProfiles Protein kinase domain profile. 332 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1548 606 FunFam Nuclear pore complex protein NUP107 25 180 - -
Lele23g1548 606 Gene3D Ribonuclease Inhibitor 133 183 IPR032675 -
Lele23g1548 606 Gene3D Ribonuclease Inhibitor 27 132 IPR032675 -
Lele23g1548 606 MobiDBLite consensus disorder prediction 282 309 - -
Lele23g1548 606 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Lele23g1548 606 Pfam Protein kinase domain 336 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1548 606 SUPERFAMILY L domain-like 25 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1548 Lele-ChrLele23 19860170 19862079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1548 1 604 Receptor kinase-like Gene Family AT3G42880 47.962 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele23g1548 Pkinase 2.9e-26 CL0016