Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1544 ATGTCGAGCTCCTCGGATTTTTCCGGCCTGAAGCCGGCCAAGTTGCCGGAGAAGCCCTCTTTCTCCCAGACTTGTAGTATGCTGAGTCAGTACCTGAAGGAGAAGGGAAGCTTTGGAGATCTCAGCCTCGGGATGACGCGCGGCGCCGAAGCAATTGGGTCAACTGAAGCATCTTGTCAGACTGCGACAACCATGGACTTATTTCCAACCAAGGAAAACACTGTGACTAAGGATCCTAAAGCTCCACAGTTGACAATCTTTTACGGCGGACAAGTCCTTGTTTTCGATGATTTTCCGGCCGAGAAAGCCAAGGAGATCATGAGTTTTGCCAGCAACGGAAACTCCCAAAGCCAGAACACCTCTGTTTACACTTTTGCTCAGAGCTCACCTTCGTTTCCTGCTAATTTGGTCAGACCCTCTGCTGATCCAAGCGCTTTAATCACTCCTCGTCCTCTAGCACCATCCAGACCTGTTGCTTGCGATCTACCTATTATGCGTAACGCATCACTTCACCGGTTCTTGGAGAAGAGAAAGGATAGCTTGGTTTCTCCTAAGTCAGGATTCAAACTCACAAGCTTTCAAAGTATAGATGGTAGTCCTAACCAAGTAACCAACCCTTTAAGGAGCGACATTAATGATACAAAATATTTATGGAGATTAATTCGCAGGGGGTTTGATGTTCGTCGTTTAAGGCTATCATCAAAGTTAACTGCGCATATTGTGCTGTGTATTTCCCATCCTTATACTCTCTCCTCTGATATGGTGCAACATGTATTTCCTGATTTGTTTCAATTGCTGTCTGCAAGAATTGTAAGAGTACCGATGCATATAGTTAATTGTATGTTAAAGTTTGCTAATCCTGATTCTCTTCTTACACTTAGCAAGAGTTAA 891 0.4467 MSSSSDFSGLKPAKLPEKPSFSQTCSMLSQYLKEKGSFGDLSLGMTRGAEAIGSTEASCQTATTMDLFPTKENTVTKDPKAPQLTIFYGGQVLVFDDFPAEKAKEIMSFASNGNSQSQNTSVYTFAQSSPSFPANLVRPSADPSALITPRPLAPSRPVACDLPIMRNASLHRFLEKRKDSLVSPKSGFKLTSFQSIDGSPNQVTNPLRSDINDTKYLWRLIRRGFDVRRLRLSSKLTAHIVLCISHPYTLSSDMVQHVFPDLFQLLSARIVRVPMHIVNCMLKFANPDSLLTLSKS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1544 296 MobiDBLite consensus disorder prediction 1 21 - -
Lele23g1544 296 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 189 IPR040390 -
Lele23g1544 296 ProSiteProfiles Tify domain profile. 77 112 IPR010399 -
Lele23g1544 296 Pfam Jas motif 163 183 IPR018467 -
Lele23g1544 296 Pfam tify domain 79 111 IPR010399 -
Lele23g1544 296 SMART tify_2 77 112 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1544 Lele-ChrLele23 19836380 19840696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1544 6 179 Tify Gene Family AT1G74950 39.301 1.16e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele23g1544 tify 1.8e-18 No_clan