Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1536 ATGAGTGGGATGAAGCTCAAGTTCGTAGCTCTGCAAGTTTTTCTACTTTTGGCGGCTCTTCTTGGTTTCAATGCACTAGAATCCAATGTGACAGTGAATGAGATGACTTGCGGTTCCTTAAACAGTCCCAAGAATAGAGAAAGTGGAGATCCATGCCCAGATGGTTGGCTTGTTGACCCTAATAAAGCCAGGTGCTTTTGCCATGTTGAAAAGCCTCAATCTTGGAATGACTCAGAGACCCTTTGTAATAAATGTGGCGGACATTTAGCTTCTTTGATATCTCTTCCAGAACTACACTTTGCTCAGAGTCTCTGTGGTGACAGTTGCTGGGTTGGAGGAAGAAGAATTAACTCTACAGCTGCTTATGAGTGGGTGTGGTCTGACAGATCTCAATGGAATAAGTCCATGTTTCCTTTGTGGCTTGATCGAACTAATTGTACTGGATTATCCTGCAAGACAAAAGATGCAGTCGATACATGTACAATTATGACTAATCATTCGGATTCTCTTATGAGTGATAGATGCGACAAACTGAATGCGGCAGTGTGTGTACTTGATATAGATAAAAAATGTTACCACATGCGCTGCTACAGGGAATATATTATCATCCTTGCAGGGGTGAGTGCATTGATCCTCTGTACAACGGCAGCTGTTGTGGTATGGCTTCTTGCACATAAACGGAGCAAGAAGAGAAGACGATCTAGAAAAGTATCTAATCCTGCTGCTTCTCAGTTAGTTCCTCCCTCATGGAAAGTTTTTACCAAAGAGGAATTAAGGTCGATTACAAAGAACTTTAGTGAAGGTAACCGCCTTGTTGGGGATGCCAAGACTGGTGGTACATATAGTGCAGTCCTACCTGATGGCTCAAAGGTTGCAGTCAAAAGATTGAAGAAGTCAAGTTTTCAGAGGAAAAAGGAGTTCTATTCTGAAATTGGTAGGGTTGCAAGACTTCGGCATCCTAATTTGGTGGCTGTGAAGGGATGCTGCTATGATCATGGTGACCGCTACATTGTTTATGAGTTTGTAGTGAATGGCCCCTTAGACAAATGGCTACATCATATACAAAGGGGAGGTCGCAGCTTAGATTGGACTATGAGAATGAAAATTGCCACAACACTTGCTCAAGGAATTGCTTTTCTGCATGACAAGGTGAAGCCACAAGTTGTTCATCGGGATATACGGGCCAGTAACGTACTGCTGGATGAGGAGTTTGGAGTTCACCTTATGGGAGTTGGTCTATCCAAGTTCGTGCCATACGAAGCAATGTGTGAGAGGACAGTGATGGCAGGTGGAACTTATGGATATCTTGCTCCAGAGTTTGTGTATAGAAATGAGCTGACCACGAAGAGCGATGTTTATAGTTTTGGCGTACTGTTACTTGAGATAGTGAGCGGACGTAGACCTGCACAGGCAGTGGATTCAGTGGGTTGGCAGAGCATATTCGAATGGGCAACGCCGCTAGTGCAAGCACATCGTTATCCAGAACTGTTGGATCCTCATATTTCTTCCTCCTCCTCATCATCCACCATCCCTGAGGCTAGTACAATCCAGAAGGTGGTTGACCTTGTCTATTCATGCACACAGCATGTCCCATCTATGCGTCCTAGAATGTCTCATGTTGTCCATCAGCTCCAACAATTGGCTAACCCACCAACCAAGTGA 1662 0.4422 MSGMKLKFVALQVFLLLAALLGFNALESNVTVNEMTCGSLNSPKNRESGDPCPDGWLVDPNKARCFCHVEKPQSWNDSETLCNKCGGHLASLISLPELHFAQSLCGDSCWVGGRRINSTAAYEWVWSDRSQWNKSMFPLWLDRTNCTGLSCKTKDAVDTCTIMTNHSDSLMSDRCDKLNAAVCVLDIDKKCYHMRCYREYIIILAGVSALILCTTAAVVVWLLAHKRSKKRRRSRKVSNPAASQLVPPSWKVFTKEELRSITKNFSEGNRLVGDAKTGGTYSAVLPDGSKVAVKRLKKSSFQRKKEFYSEIGRVARLRHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDKWLHHIQRGGRSLDWTMRMKIATTLAQGIAFLHDKVKPQVVHRDIRASNVLLDEEFGVHLMGVGLSKFVPYEAMCERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQAHRYPELLDPHISSSSSSSTIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQLANPPTK 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1536 553 FunFam C-type lectin receptor-like tyrosine-protein kinase 243 341 - -
Lele23g1536 553 SMART tyrkin_6 265 544 IPR020635 GO:0004713|GO:0006468
Lele23g1536 553 Gene3D Phosphorylase Kinase; domain 1 224 341 - -
Lele23g1536 553 Pfam Protein tyrosine and serine/threonine kinase 287 544 IPR001245 GO:0004672|GO:0006468
Lele23g1536 553 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 342 553 - -
Lele23g1536 553 ProSiteProfiles Protein kinase domain profile. 266 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1536 553 SUPERFAMILY C-type lectin-like 25 186 IPR016187 -
Lele23g1536 553 Gene3D - 25 186 IPR016186 -
Lele23g1536 553 ProSiteProfiles C-type lectin domain profile. 61 184 IPR001304 -
Lele23g1536 553 Gene3D Transferase(Phosphotransferase) domain 1 342 549 - -
Lele23g1536 553 SMART CLECT_2 52 184 IPR001304 -
Lele23g1536 553 CDD CLECT 64 183 - -
Lele23g1536 553 Pfam Lectin C-type domain 72 184 IPR001304 -
Lele23g1536 553 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 175 547 - -
Lele23g1536 553 SUPERFAMILY Protein kinase-like (PK-like) 239 545 IPR011009 -
Lele23g1536 553 ProSitePatterns Tyrosine protein kinases specific active-site signature. 388 400 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1536 Lele-ChrLele23 19771689 19775360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1536 81 550 Receptor kinase-like Gene Family AT1G52310 69.665 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Lele23g1536 PK_Tyr_Ser-Thr 5e-41 CL0016