Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1525 ATGGGGAGAGAAAGAGAGGTGTCGAAACAGCAACAGCAGCAGGTGGGATACGCGCAGCAGCTTGTCGCCGTTAATCGCTACAATCCTGACATCCTTCCCGATCTCGAAAACCATGTTAACGAGCAGGTTTCATCACAAACATACAGCTTGGATGCAAATCTATGCCTTCTTCGCCTCTATCAGTTTGAACCAGAGAGAATGAGTTCTCAGATTGTTGCCCGCATATTAGTTAAGGCCCTCATGGCAATGCCAGCTCCGGACTTCAGCCTTTGTCTCTTTCTGATTCCAGAACGTGTGCAAATGGAGGAGCAATTCAAGACTCTGATTGTTTTATCACACTATTTGGAGACAGGAAGATTTCGCCAGTTTTGGGATGAAGCAGCAAAGAGTCGTCATATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCAATTCAAGGTTATGCAATTCATGTCCTCTCCTTAACTTACCAAAAAGTTCCTAGATCTGTGCTGGCCGAGGCCATCAACATAGAAGGCTTGGCCTTGGACAAATTCCTTGAACACCAAGTAGCCAACGGGGGTTGGGTCATTGAGATAGGCCATGGCAAGGGTCAACTTATTGTCCTACCCAGAAATGAATTCAATGACCCAGCATCAAAGAAAAACACTGCAGACAGCGTGCCATTGGATCAAATTACACGCATTTTCCCTATTCTTGGCTGA 702 0.4601 MGREREVSKQQQQQVGYAQQLVAVNRYNPDILPDLENHVNEQVSSQTYSLDANLCLLRLYQFEPERMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKSRHIVEAVPGFEQAIQGYAIHVLSLTYQKVPRSVLAEAINIEGLALDKFLEHQVANGGWVIEIGHGKGQLIVLPRNEFNDPASKKNTADSVPLDQITRIFPILG 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1525 233 Gene3D - 129 231 IPR036388 -
Lele23g1525 233 ProSiteProfiles PCI domain profile. 48 206 IPR000717 -
Lele23g1525 233 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 9 233 IPR009374 GO:0003743|GO:0005737|GO:0005852
Lele23g1525 233 SUPERFAMILY ARM repeat 11 135 IPR016024 -
Lele23g1525 233 Pfam CSN8/PSMD8/EIF3K family 68 195 IPR033464 -
Lele23g1525 233 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 7 230 IPR009374 GO:0003743|GO:0005737|GO:0005852
Lele23g1525 233 SUPERFAMILY "Winged helix" DNA-binding domain 138 230 IPR036390 -
Lele23g1525 233 FunFam Eukaryotic translation initiation factor 3 subunit K 10 126 - -
Lele23g1525 233 FunFam Eukaryotic translation initiation factor 3 subunit K 129 232 - -
Lele23g1525 233 Gene3D ARM repeat; domain 1 7 126 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1525 Lele-ChrLele23 19675538 19678013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1525 6 233 Eukaryotic Initiation Factors Gene Family AT4G33250 73.246 7.20e-124 348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1525 23 19675538 19678013 Lele23g1525 23 19675538 19678013 ECH
Lele21g0521 21 3451979 3454535 Lele23g1525 23 19675538 19678013 hybridization
Lele22g0538 22 3467118 3469647 Lele23g1525 23 19675538 19678013 hybridization