Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1518 ATGGCAACGGTGAACAAAGCAGGCTCTTTGATTTCCCTTATCCACTCCCTCCCACTAAGCCATCGTCTTCCCTGCTGGAATCTTCAAGCTGAAATTGTTCAATATTATGCTTCTTGCTCTCGCCGGGTATGCAAACTGCACCCGATCGAATTCCACTTCCCCTTAAAGGCTCTCCAGAATCTCTCCGTTCATGTTGTTCGAATCAATCTTCGATGGCGTGAGCGTCAGCAACGGAGGAGCAGGACAGATGTGAGTGACGGCGGTGGCTGTTCCCATACCATGGCGTTTCAAGACTTCGATCTCATCACTGAGAAAAGAAAAAATGACAGGAAACAGAAGCTCAAGCGCAGAATCGCCATCGGCGCAGTTTGCACTATCGTCATCATTGGTCTTATAGGAGCAGCCGCTTTCGTAATCGTCAGCAATAACAGTGAAGAAGAAAGCGAAGTCAATGACCATAGCAAGAAATCCCCATCGTCGTCCTCCTCCTCTTCTTCCTCAAAGAGTGAATCCAACCAAATTTCTGTAGCAGCAAAACTCGTGAAGACCATTTGCAGTTCCACAGACTATCAGGAAAAATGCGAGACAAGTCTCACCAAGGAAGTGAAAAAGGATCCGAAACTAGCACAACCCAAAGACGTCCTTAAACTTGCTATCAGTGTCGCACAGGACGAGGTTAATAAGGCCATCAATAAAACCAAAAGCCTAAACTTTCAATCTGACAAAGAGAAAGGGGCGTACGAGGATTGCACGAAGCTTCTGGATCGTGCGAAATACGATATAGGGAATTCATCCTCACATGTTGGATCAATCGACATGACCAAGCTGACGTCCTCCTCATCGGATTTGAACAGTTGGCTCAGTGCAGTTATCGCGTTCCAGGGAGCTTGCCTTGATGGGTTTGAAGATGGGAAACTGAAGACGGATATGAAGAGTGCGTTTAATGATTCAACGGAGTATGTTAGCAATTCTCTTGCAATTCTATCGCAGTTAGGCTCCGTTGTTTCTTCGGCATTAAAGGAAGGTGCTAGTCGTCACTTGCTGTCGTCCAATGATAAAGATCTTCCGGAGTGGATGAACGATGAAGAACGACGGATGCTGAAGGCGGCGGATGATAAACCTACTCCTAACGTCACCGTCGCTAGGGACGGCAGTGGAGACTTCAAAACCATCTCTGAAGCTTTAAAAGCCATACCACAAAAATACGATGGACGGTATGTGGTTTATGTTAAGGCAGGAATATATGACGAGACTGTGTTAATAGAAGGGCGAATGGTAAACGTAACCCTTTACGGCGACGGATCACAAAAAACCATTATCACCGGCAACAAGAACTACGTAGATGGAGTAAGGACTTTCCAAACTGCATCATTTGCGGTAGAAGCAGATGGGTTCTTAGGGAAAGCAATGGGGTTCAGAAACACAGCAGGTCCAGAGAAGCACCAAGCTGTAGCAGCAAGAGTGCAAGGAGATCGTGCCGTGTTCGTGAACAGTCGTTTTGAAGGGTACCAAGACACTCTCTACGCACTAGCCCACCGGCAATTCTATCGGAGCTGCGTGATCTCCGGCACGGTGGACTTCATCTTTGGCGACGCAGCCGCCGTGTTCCAGAACTGCATAATGAACATAAGGAAACCCTTAGACAACCAGCAGAACATAGTGACAGCCCAAGGAAGAATGGACCCACAAGAAAAAACCGCCATCGTTATACAAAACTGTCAGATCAAGGCCGACGACTCACTCGCCGCCGTGGAAGGCAAGTTCAAGAGCTACCTCGGACGGCCATGGAAGGAGTACTCGAGAACCATCGTCATGGAATCCGAGATCGATGACGTCATCGACCCTGAAGGTTGGATGGAATGGGAAGGCGACTTTGCACTCAAAACTTTGTTCTATGCTGAGTTCAACAATACAGGACCGGGTTCGAACACTGATAATAGAGTGAAGTGGGGTGGCTACAAAAAGATCACTAGGGACGAGGCTAGCAACTTCACCGTCGAATCTTTCTTGTCCGGTAATTGGCTCTCTGGGTTCAACATACCGGTTGAGCAAGGCTTGTATAATTGA 2067 0.4756 MATVNKAGSLISLIHSLPLSHRLPCWNLQAEIVQYYASCSRRVCKLHPIEFHFPLKALQNLSVHVVRINLRWRERQQRRSRTDVSDGGGCSHTMAFQDFDLITEKRKNDRKQKLKRRIAIGAVCTIVIIGLIGAAAFVIVSNNSEEESEVNDHSKKSPSSSSSSSSSKSESNQISVAAKLVKTICSSTDYQEKCETSLTKEVKKDPKLAQPKDVLKLAISVAQDEVNKAINKTKSLNFQSDKEKGAYEDCTKLLDRAKYDIGNSSSHVGSIDMTKLTSSSSDLNSWLSAVIAFQGACLDGFEDGKLKTDMKSAFNDSTEYVSNSLAILSQLGSVVSSALKEGASRHLLSSNDKDLPEWMNDEERRMLKAADDKPTPNVTVARDGSGDFKTISEALKAIPQKYDGRYVVYVKAGIYDETVLIEGRMVNVTLYGDGSQKTIITGNKNYVDGVRTFQTASFAVEADGFLGKAMGFRNTAGPEKHQAVAARVQGDRAVFVNSRFEGYQDTLYALAHRQFYRSCVISGTVDFIFGDAAAVFQNCIMNIRKPLDNQQNIVTAQGRMDPQEKTAIVIQNCQIKADDSLAAVEGKFKSYLGRPWKEYSRTIVMESEIDDVIDPEGWMEWEGDFALKTLFYAEFNNTGPGSNTDNRVKWGGYKKITRDEASNFTVESFLSGNWLSGFNIPVEQGLYN 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1518 688 Pfam Plant invertase/pectin methylesterase inhibitor 180 327 IPR006501 GO:0004857
Lele23g1518 688 SUPERFAMILY Pectin lyase-like 375 677 IPR011050 -
Lele23g1518 688 SMART PMEI_2 176 327 IPR006501 GO:0004857
Lele23g1518 688 MobiDBLite consensus disorder prediction 155 170 - -
Lele23g1518 688 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 179 331 IPR035513 -
Lele23g1518 688 Gene3D Invertase/pectin methylesterase inhibitor family protein 177 333 IPR035513 -
Lele23g1518 688 Pfam Pectinesterase 377 673 IPR000070 GO:0030599|GO:0042545
Lele23g1518 688 TIGRFAM PME_inhib: pectinesterase inhibitor domain 163 331 IPR006501 GO:0004857
Lele23g1518 688 MobiDBLite consensus disorder prediction 147 170 - -
Lele23g1518 688 PANTHER PECTINESTERASE 140 676 - -
Lele23g1518 688 ProSitePatterns Pectinesterase signature 2. 521 530 IPR033131 -
Lele23g1518 688 FunFam Pectinesterase 371 686 - -
Lele23g1518 688 CDD PMEI-like_3 183 333 - -
Lele23g1518 688 FunFam Pectinesterase 177 332 - -
Lele23g1518 688 Gene3D - 371 686 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1518 Lele-ChrLele23 19616764 19619906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1518 94 688 Carbohydrate Esterase AT2G26450 47.411 0.0 592