Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1509 ATGGAGGGAAAGCTTGACTCTGATGATGGCGTGAAGCCCGTGACAGAGCAAGGAGCCGGAGTAGAGAACGGCCAAGACTTGGTGGTTCCAGAATCTTCTCCTCTCACTGCGAATTCTAACAAAAATGTTGATGGTGATGCTTGCAATGGAGAGGCTGTTGAAGAATCTGCTGGAGATTTATTGGGAAAGAAGTATCTCTCTGCAAACAGGTCAATGCCAGCATCTGGACCAACTCAGCTCACCATCTTCTTTAATGGGAATGTTTGTGTCTATGATGGAATTCCTGCAGAGAAGGTGCATGAGATAATATGTATTGCTGCTTCTGCTGCTAAGTCTGCTGACATGAAGAGTGGAATACAATCCTCCTTTACTTCACCCATTCCCACAAGGCCTTCTTCTCCACAGGGAACTCCTAATATTGTGGCTTCACCAAAACCTCTCTGTTTTCCTGGGCAGAAGAGTTCCATTTGTGGGTTGCAAGAATTTCCAATTGCACGCAGACAGTCATTGCAGCGCTTTCTTGAGAAGCGACGAGATAGGCTGGGAAGCAGAGCCCCTTATGCTTCTCCGGCAAGAACTAAAGTGTCTGAAAATACAGAGAACAGTTGCAGTGCTGATAATGCACCTGATCTGGTTTCCTTCAAACACTCGGAGGAGGAGATTCAACCTAGTATCACTGCCTCTTAA 687 0.4629 MEGKLDSDDGVKPVTEQGAGVENGQDLVVPESSPLTANSNKNVDGDACNGEAVEESAGDLLGKKYLSANRSMPASGPTQLTIFFNGNVCVYDGIPAEKVHEIICIAASAAKSADMKSGIQSSFTSPIPTRPSSPQGTPNIVASPKPLCFPGQKSSICGLQEFPIARRQSLQRFLEKRRDRLGSRAPYASPARTKVSENTENSCSADNAPDLVSFKHSEEEIQPSITAS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1509 228 Pfam tify domain 75 107 IPR010399 -
Lele23g1509 228 MobiDBLite consensus disorder prediction 177 228 - -
Lele23g1509 228 MobiDBLite consensus disorder prediction 192 208 - -
Lele23g1509 228 MobiDBLite consensus disorder prediction 1 49 - -
Lele23g1509 228 Pfam Jas motif 163 187 IPR018467 -
Lele23g1509 228 MobiDBLite consensus disorder prediction 29 45 - -
Lele23g1509 228 SMART tify_2 73 108 IPR010399 -
Lele23g1509 228 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 46 200 IPR040390 -
Lele23g1509 228 ProSiteProfiles Tify domain profile. 73 108 IPR010399 -
Lele23g1509 228 MobiDBLite consensus disorder prediction 120 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1509 Lele-ChrLele23 19545399 19548093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1509 44 187 Tify Gene Family AT5G20900 45.333 1.46e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele23g1509 tify 2.9e-14 No_clan