Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1507 ATGATAAGCTTGTACACACCCGTTATTGCAGATGGCAAGCATGTAAGCATCAAGAACAGCTTAGGATCTGGGAAGAACATGACCCTGCATTGCCAATCCAAAGATAATGATCTGGGTGAACATATCATAGAAGATGGAGATGAATTCGGCTGGGACTTCAATGACAATGTAACTGGTACCACGCTGTTTTTCTGTTATATGGAGTGGGAAAGTGTTCAGCAGTACCACTTTGATGCTTATGAATTTGGCAGAGACTTTTTCAGGTGTAACACCGGATGTGCATGGCTTATATCAGCTGAAGGCATCTATGGTTTAAATGGACAAAAGGGGTACTGGGAATTCATATACAACTTGCCTACAAGTTGA 366 0.418 MISLYTPVIADGKHVSIKNSLGSGKNMTLHCQSKDNDLGEHIIEDGDEFGWDFNDNVTGTTLFFCYMEWESVQQYHFDAYEFGRDFFRCNTGCAWLISAEGIYGLNGQKGYWEFIYNLPTS 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1507 121 PANTHER - 11 106 IPR010264 -
Lele23g1507 121 Pfam Plant self-incompatibility protein S1 14 117 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1507 Lele-ChrLele23 19538923 19539288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1507 15 106 Carbohydrate Esterase AT3G16970 35.417 6.47e-10 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0539 21 3581706 3582564 Lele23g1507 23 19538923 19539288 hybridization
Lele22g0552 22 3578852 3579268 Lele23g1507 23 19538923 19539288 hybridization