Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1503 ATGAGAACGGAAGAACAGGTTGATGGCCAGCAAACCCAGTCATCATCATCATCTTCTTCTCCTTCAATTGATAGCAGTAATTACCTTTCTGGGACTGAGAAGCCTACAGCTTCTTCTTCTTCTTCTCACTCTTCCTCTTCGTGTCTCTCAAGTGTTTGTAGAAATGCTAACAGTTCCAGAACTGATTTGATCACTGACCTCAGACTTGGTCTTACCATTTCTCCTTCTCAACCTGGCTTTTCCAATTCAAAGCCCAGGTCAAGGAATCAAACTTCAGATTGGCCTCCAATCAAGTCCATACTGAGAAGCACTCATGTGGAGAAACAGAACCAGTGGAGCCAAAGGCCCTCCTTATTCGTCAAAGTGTACATGGAAGGCATACCCATTGGTAGAAAACTGAACCTTCTGGCACACTATAGCTATGATGATCTTGTCAGAGCCCTAGGCCACATGTTCAGGACCACCATTCTCTGCCCTGATTCCCAACCGCTTCATTCTGGGCATTTTCACATGTTAACTTATGAGGATCAAGAAGGGGACTGGATGATGGTTGGAGATGTGCCATGGGAGATGTTCTTGACCAGTGTGAAAAGGCTGAAGATCACCAGAGCAGATAGATGCTAG 624 0.4535 MRTEEQVDGQQTQSSSSSSSPSIDSSNYLSGTEKPTASSSSSHSSSSCLSSVCRNANSSRTDLITDLRLGLTISPSQPGFSNSKPRSRNQTSDWPPIKSILRSTHVEKQNQWSQRPSLFVKVYMEGIPIGRKLNLLAHYSYDDLVRALGHMFRTTILCPDSQPLHSGHFHMLTYEDQEGDWMMVGDVPWEMFLTSVKRLKITRADRC 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1503 207 MobiDBLite consensus disorder prediction 1 51 - -
Lele23g1503 207 Pfam AUX/IAA family 22 203 IPR033389 -
Lele23g1503 207 SUPERFAMILY CAD & PB1 domains 109 201 - -
Lele23g1503 207 ProSiteProfiles PB1 domain profile. 117 206 IPR000270 GO:0005515
Lele23g1503 207 Gene3D - 112 207 - -
Lele23g1503 207 MobiDBLite consensus disorder prediction 74 96 - -
Lele23g1503 207 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 64 205 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1503 Lele-ChrLele23 19509904 19511206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1503 119 201 B3 DNA Binding Superfamily AT5G37020 42.169 1.41e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele23g1503 AUX_IAA 6.5e-34 CL0072