Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1490 ATGAAAAGAGAGACAAGAAATTCAGTAAGTAATCCTGAAAAAGTTCAGGGAGAGTCAGACAAGAATCAGGGTTCAAAGAAGAACATTAAGGAAAAGGATGAAACCACCAACAACACTGTACCTCTTTACAAGCTTTTCTCATTTGCAGATTCTATGGATTATATGTTGATGCTTGTGGGGACAGTTAGTGCGGCTGCAAATGGAATGGCTATGCCCTTAATGATTCTATTTCTTGGAGATGTAATTGATGCTTTTGGAAGATCCGCAGACACCAAACAAGTTGTCCATGAAGTTTCCATGGTGTCACTGAAGTTCATATACTTGGCAATTGGTTCCTTTATTATGTCATTTCTTCAGGTGACATGCTGGATGGTCACTGGAGAAAGACAGGCTGCAAGAATAAGAGGTTTATACCTGAAGACAATTCTGAGGCAGGACATCAGTTTCTTTGATAAGGAAACTAACACTGGTGAGGTTGTTGGAAGGATGTCAGGTGATACTGTTCTTATTCAAGATGCCATGGGAGAGAAGGTAGGACAGTTCATACAGTGTGTGGCAACTTTTTTTGGAGGTTTTATCATAGCATTCATCGAGGGTTGGCTTCTAACTCTTGTAATGCTATCTTCTATTCCTCCTATTGTCTTTTCTGGTGCTATGATGAGCATTGTTCTCGCCAAAGCAACATCCCGTGGACAAAAAGCTTATTCTTCTGCTGCAAGTATAGTAGACCAGACAATTGGTTCTATCCAAACAGTGGCATCATTCACAGGGGAGAAGCAAGCTATAGCTAAATATGATCAGTTCTTGATTAAAGCCTACAGGACTAGTGTGCAAGAGGGACTTGCTTCTGGTTTGGGTTTTGGTTCAACTTTTCTTCTTTTTTTCTTCACTTATGGTTTGGCAGTATGGTATGGTGGGAAAATGGTACTGGAGAAAGGATATACAGGAGGGAAGGTTATGACTGTAATTTTCTCTGTTGTGACAGGCTCCATGTCTCTGGGGCAGGCATCTCCAAGCATGAGTGCTTTTGCTGCAGGACAAGCTGCAGCCTCTAAGATCATTAAAGAGAACATTGCCTATGGTAAGGATGGTGCAACAGATGAAGAAATCACAGCTGCAGCAGAGCTTGCTTATGCTGCAAAATTCATAGATAAACTTCCTCAGCAAGGAAAAATAGTAGACAAAGGTTCACATGCTGAGCTTACTAAGGTCCCCGATGGAGCCTATAGCCAACTCATTAGATTGCAGGAAACAAAGGAGTCAGAGAATATTAATGCAAATGACACAGATAAGCCAGAAAAAATAATGAATTCTGAAAGGCAATCAAGCCAACGACTTTCTTCCTTAAAATCTGTAAGTCGAGAGTCATCTGGACTTGGAAGAAGCAGTCGTCGTTCATTCTCAGTGTCTCCAACAAATGGACACTTTGAAACAGAAGGTGCAGAACCTAAAGCTCCTAGTTCAAAAGATTCCCCAACACCTCTAGACGTGCCACTCTACCGCCTGGCTTATCTGAACAAACCTGAGATTCCAGTTTTGTTTGTAGGGACTCTAGTAGCTGTGGCAAATGCAGCAATATTCCCAGCTTTCGGGCTACTGATCTCCAAAATGATAAACACTTTCTATGAACCTGCAGATAAACTCAGTAAAGATTCAAAGTTTTGGGCATTGATATTTGTTGCCCTTGGTGTGGCATCCTTCTTAGTAATTCCAGCAAAGTTCTACTTTTTTGCTGTTGCTGGTGGTAAGTTGATAAGAAGGATCCGGCTAATGTGTTTTGAGAAAATAATCCATATGGAAGTAAGTTGGTTTGATGAAGCTGAGCATACAAGCGGAGTCCTTGGAGCCAGGCTCTCTACTGATGCAGCTTCCATCCGAGCTTTGGTCGGAGATGCACTTGTTTTGCTGGTTCAAAATATTGGTACTGCAATTATTGGTTTCGCCATTGCTTTGGAGGCATGCTGGCAGCTTGCTCTTATAATTCTTGTTATGGTACCCTTATTAGTACTCAATGGATACGCACAGTTCAAGTTCATAGAAGGATTCAGCACAGACGCTAAGAAATTGTATGAGGAAGCAAGTCAAGTGGCAAATGATGCAGTAGGGAGTATTAGAACAATTGCCTCTTTCTGTGCTGAAGAGAAGGTGATGGAATTATACCATAGAAGATGTGAAGGGCCAATTAAAACAGGCATAAGGAGAGGGATAATAAGTGGAACTGGATTTGGTTTATCATTCTTCTTGCTGTTTTCTGTCTATGCATGCAGTTTCTATGCCGGAGCTCGACTCGTACAAGATGGCAAATCATCATTCTCAGATGTTTTTCGTGTCTTCTTTGCTCTCATTGTAACAGCATTAGGAATCTCCCAATTTAGCTCAATGGCTCCTGATTCAAGTAAAGCAAAGAGTTCTGTTGGTTCTATATTTGCTATTCTTGATGGGAAATCAAAAGTAGACCCAAGTGATGACACTGGAATCACATTGGAACACTTAATGGGAGAAATCGAGTTTCGCAATGTCAGTTTCAAGTATCCAACCAGACCTGATTTTCAAGTATTCAGAGATCTTTCCTTGAGCATTCGTTCAGGAAAGGCTGAAATTATTGCTGCAGCAGAACTGGCAAATGCCCACAAGTTCATTTCTAGTTTGCAGCAGGGGTATGACACAATAGTAGGAGAGAGAGGAATTCAGTTATCCGGGGGACAGAGGCAGCGGGTGGCTATTGCGCGAGCCATAGTGAAGAATCCGAAAATATTACTTCTAGATGAAGCTACCAGCGCCCTAGATGCAGAATCTGAGAAAGTGTTGCAGGATGCATTGGATCAAATTATGGTGGAAAGAACCACAGTAGTAGTGGCTCATAGGTTATCCACAGTTAAGAATGCAGATTTGATTGCAGTAATTAAAAATGGAGTCGTAGAAGAGAAGGGAAAGCATGAAACTTTGCTCAACAAAGGTGGTGCCTATGCTTCCTTAGTAGCATTGCACACAAGTTCTTCCATAAAACAACTCAATTGA 3018 0.4148 MKRETRNSVSNPEKVQGESDKNQGSKKNIKEKDETTNNTVPLYKLFSFADSMDYMLMLVGTVSAAANGMAMPLMILFLGDVIDAFGRSADTKQVVHEVSMVSLKFIYLAIGSFIMSFLQVTCWMVTGERQAARIRGLYLKTILRQDISFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGQFIQCVATFFGGFIIAFIEGWLLTLVMLSSIPPIVFSGAMMSIVLAKATSRGQKAYSSAASIVDQTIGSIQTVASFTGEKQAIAKYDQFLIKAYRTSVQEGLASGLGFGSTFLLFFFTYGLAVWYGGKMVLEKGYTGGKVMTVIFSVVTGSMSLGQASPSMSAFAAGQAAASKIIKENIAYGKDGATDEEITAAAELAYAAKFIDKLPQQGKIVDKGSHAELTKVPDGAYSQLIRLQETKESENINANDTDKPEKIMNSERQSSQRLSSLKSVSRESSGLGRSSRRSFSVSPTNGHFETEGAEPKAPSSKDSPTPLDVPLYRLAYLNKPEIPVLFVGTLVAVANAAIFPAFGLLISKMINTFYEPADKLSKDSKFWALIFVALGVASFLVIPAKFYFFAVAGGKLIRRIRLMCFEKIIHMEVSWFDEAEHTSGVLGARLSTDAASIRALVGDALVLLVQNIGTAIIGFAIALEACWQLALIILVMVPLLVLNGYAQFKFIEGFSTDAKKLYEEASQVANDAVGSIRTIASFCAEEKVMELYHRRCEGPIKTGIRRGIISGTGFGLSFFLLFSVYACSFYAGARLVQDGKSSFSDVFRVFFALIVTALGISQFSSMAPDSSKAKSSVGSIFAILDGKSKVDPSDDTGITLEHLMGEIEFRNVSFKYPTRPDFQVFRDLSLSIRSGKAEIIAAAELANAHKFISSLQQGYDTIVGERGIQLSGGQRQRVAIARAIVKNPKILLLDEATSALDAESEKVLQDALDQIMVERTTVVVAHRLSTVKNADLIAVIKNGVVEEKGKHETLLNKGGAYASLVALHTSSSIKQLN 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1490 1005 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 704 995 IPR003439 GO:0005524
Lele23g1490 1005 MobiDBLite consensus disorder prediction 1 33 - -
Lele23g1490 1005 Pfam ABC transporter 863 926 IPR003439 GO:0005524
Lele23g1490 1005 Pfam ABC transporter transmembrane region 513 786 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele23g1490 1005 Pfam ABC transporter transmembrane region 57 331 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele23g1490 1005 PANTHER ABC TRANSPORTER B FAMILY 17 354 - -
Lele23g1490 1005 CDD ABC_6TM_Pgp_ABCB1_D1_like 57 341 - -
Lele23g1490 1005 SUPERFAMILY ABC transporter transmembrane region 501 815 IPR036640 GO:0005524|GO:0016020
Lele23g1490 1005 MobiDBLite consensus disorder prediction 416 492 - -
Lele23g1490 1005 MobiDBLite consensus disorder prediction 439 475 - -
Lele23g1490 1005 FunFam ABC multidrug transporter, putative 868 997 - -
Lele23g1490 1005 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 58 345 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele23g1490 1005 FunFam ABC transporter B family member 1 494 801 - -
Lele23g1490 1005 ProSitePatterns ABC transporters family signature. 898 912 IPR017871 GO:0005524|GO:0016887
Lele23g1490 1005 Gene3D ABC transporter type 1, transmembrane domain 498 802 IPR036640 GO:0005524|GO:0016020
Lele23g1490 1005 Gene3D ABC transporter type 1, transmembrane domain 803 824 IPR036640 GO:0005524|GO:0016020
Lele23g1490 1005 FunFam ABC transporter B family member 9 44 369 - -
Lele23g1490 1005 Gene3D - 866 997 IPR027417 -
Lele23g1490 1005 Gene3D - 825 864 IPR027417 -
Lele23g1490 1005 CDD ABC_6TM_Pgp_ABCB1_D2_like 503 818 - -
Lele23g1490 1005 MobiDBLite consensus disorder prediction 421 438 - -
Lele23g1490 1005 SUPERFAMILY ABC transporter transmembrane region 44 353 IPR036640 GO:0005524|GO:0016020
Lele23g1490 1005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 825 995 IPR027417 -
Lele23g1490 1005 MobiDBLite consensus disorder prediction 19 33 - -
Lele23g1490 1005 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 514 800 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele23g1490 1005 Gene3D ABC transporter type 1, transmembrane domain 52 372 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1490 Lele-ChrLele23 19435733 19442228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1490 864 999 Calmodulin-binding Proteins AT2G36910 59.420 6.72e-44 171