Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1477 ATGGGTGCGACAAACGATTGGTATATGATCAAACCAAGAGTCGGTGGTTGTGATGGTGGTGAAATGTCGCGAGTTTTTGAAGACGCAGGTCCATTGAATAACCGAAATCTTGCTCTTCAGGATACCGCCTGTCAAGTGATGGGTTCCTGCATTTATGAGGTCGGTGGGCTCTGCTTCTTGTGTGAGGAAGAGCGAGAGTATGGAAGCGGATGCGACTACAAGGGTTCGGCAGAGATCCGTTGTGTAGACACTCGCAATCCAAAAGATGGGATGGTACCAGTTTCTTACACAATTACATGCATATGTGAAGAAACAGAATCTTATAGTCGTAAACTCAAAGAAGACACGGTTTCCCTTTATACGAGGATCATGGGTTGCTTTGGCTGTTGCGAAGACAGTGACGTTCATATACAAGCTGACAATAAAACCTTCATGCAAAACAATACCGCAGGGAGAACTGGCTATCCTGGAAGAGAGGCTGTTGCAAGAACCACTCCACCCACAGTGCATTTTCAACCTATTGCTGTCCCTTCCCTTTCAATTGATGAATTAAAGTCCGTGACAGATAATTTTGGTACAAAATCCTTCATCGGGGAGGGTGCCTATGGCAAAGTATATCATGCCATATTGAGAAACGGCCGTGCTGTGGCTATAAAAATGTTGGATTCTAGTAAGCAACCAGAACAAAATTTTCTCGCGCAGGTCTCCATTGTATCAAGGTTAAGGCATGAAAATGTTATCGAACTTGTTGGTTACTGCGTTGAGGGTCCTTTTCGCACCCTAGCCTATGAGTATGCTCCTAAAGGATCACTTCATGACATCCTTCATGGACGCAAAGGCGATAAGGATGCACATCCTGGTCCGGTTCTATCTTGGGAACGGAGAGTTAAAATTGCTTTTGGAGCAGCTAAAGGACTGGAATATCTACATGAAAAAGCAGAAACTCGTATCACGCATCGCTACATTAAGTCTAGCAATATACTACTTTTTGATGATGATGTTTCAAAGATTGCTGATTTCGATTTGTCAAATCAAGCCCCCGATGAAGTGGCTCGTGTCCATTCTACTCGTGTTCTGGGAACATTCGGTTATTATGCTCCAGAATTCGCAATGACGGGAGATCTCACTATAAAGAGCGACGTTTACAGTTTTGGAGTTATATTGTTGGAACTATTAACGGGGCGTAAGCCTGTTGATCATACACTGCCGCGAGGGCAACAAAGCCTAGTGACTTGGGCAACACCAAAACTGAGTGAAGATAAGGTAAAGCAGTGTGTAGATGCCAGATTACAGGACAACTACCCTCCGAAAGCAGTTGCCAAGATGGCTGCTGTGGCTGCATTGTGTCTGCAATATGAAGCTGGGTTAAGGCCAAACATGATCATTGTCGTTAAAGCTTTACAACCTCTGTTAAATCCTCGTCCTGCTCAGCCAAAGGAAAAGTTTTGA 1449 0.4431 MGATNDWYMIKPRVGGCDGGEMSRVFEDAGPLNNRNLALQDTACQVMGSCIYEVGGLCFLCEEEREYGSGCDYKGSAEIRCVDTRNPKDGMVPVSYTITCICEETESYSRKLKEDTVSLYTRIMGCFGCCEDSDVHIQADNKTFMQNNTAGRTGYPGREAVARTTPPTVHFQPIAVPSLSIDELKSVTDNFGTKSFIGEGAYGKVYHAILRNGRAVAIKMLDSSKQPEQNFLAQVSIVSRLRHENVIELVGYCVEGPFRTLAYEYAPKGSLHDILHGRKGDKDAHPGPVLSWERRVKIAFGAAKGLEYLHEKAETRITHRYIKSSNILLFDDDVSKIADFDLSNQAPDEVARVHSTRVLGTFGYYAPEFAMTGDLTIKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDARLQDNYPPKAVAKMAAVAALCLQYEAGLRPNMIIVVKALQPLLNPRPAQPKEKF 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1477 482 Gene3D Phosphorylase Kinase; domain 1 158 265 - -
Lele23g1477 482 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 127 476 - -
Lele23g1477 482 SUPERFAMILY Protein kinase-like (PK-like) 167 467 IPR011009 -
Lele23g1477 482 FunFam pto-interacting protein 1 267 478 - -
Lele23g1477 482 ProSiteProfiles Protein kinase domain profile. 191 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1477 482 Pfam Protein tyrosine and serine/threonine kinase 195 466 IPR001245 GO:0004672|GO:0006468
Lele23g1477 482 ProSitePatterns Protein kinases ATP-binding region signature. 197 219 IPR017441 GO:0005524
Lele23g1477 482 Gene3D Transferase(Phosphotransferase) domain 1 267 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1477 Lele-ChrLele23 19343770 19348794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1477 172 468 Receptor kinase-like Gene Family AT4G02010 47.508 1.14e-81 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lele23g1477 PK_Tyr_Ser-Thr 1.9e-45 CL0016