Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1476 ATGAAAGCGGTTGGAAAGAAGAGTTTGGAGTGGAATTTGGAAGACTGGAAATGGGACGGAGATCTTTTCGCTGCTAGTCCACTAAATTCAGTTCCATCTGACTGTAGAAACAAGCAGTCTTTCCCAGTTGATCCTGAAATTCCTGCGAAAGCTAATACTTCTAACATTTTATCTTCTAATTGGGATGATGTCAACCCGGAGAAAGGAAAGAGAGAATTGGAAAAAAGGAGGAGAGCTGTTATATCTGAAGGTGATGAGCTGAGTGATGAAGCTGGTTGTCTTAATTTAAACCTTGGGGCTCAAATTTACCCTATCATGGAAGGGGATGAAAAAAGTGGAAAGAAGACAAAGATAGTTGGGAGTGGGACTACTTCAAACCGAGCGGTTTGTCAGGTGGAAGATTGTAGGGCCGATCTTAGTAATGCAAAAGATTACCACCGTCGGCATAAGGTTTGTGATGTGCATTCCAAAGCCAGCAAAGCACTGGTAGGAAATGTTATGCAGCGTTTTTGTCAACAGTGTAGCAGGTTTCATGTTCTTCAAGAGTTTGATGAGGGGAAAAGAAGTTGTCGGAGGCGTTTGGCTGGCCACAATAGGAGGAGGAGGAAGACACATCCTGATGCTGTCGTTAATGGAGGCTCCCTGAATGATGAAAGGGGCAGCAGCTATCTGTTAACAAGTCTTCTCCGTATACTGTCTAATATGCACTCAAATGGCTCAGATGCTACTAGGGACCAAGATATTCTCTCTCATCTGCTAAGGAATCTGGCAAGTGTGGCTGGTACAATCAATGGAAGGAACATAGCCTCCTTATTGGAGGGATCCCAAGGTTTGGTGAATGCTGGGACATCTGGAACTTCCCAAAAAGTGCCTAATCTAAATTCAAATGGCCCCGAACCCATCAAATCCCCTGGTTCTTCCATCAAGACAGATAATGGTCTCCGCAGTCAGGACCCTCCAAAGCCTATGGGACAGTCTGAGACAGTGCCTGCATATGATATGGCGCAAAAATGTTTACCTTCAGGTGATGCTCGGGTTGGGAGTTTAAAATCTCCTTCAGGATCAAAGCCTTCAAATGTACCCCAATCAGTTGCAGCAGAGACTACGGTTAGAAGGAACGGTTTAAATCACATTGACCTCAATAATGTATATGATGACATACAAGATGATGCTGAGAACCTTAGGAATTCTCATCCACCTGAGGCGTCAGGTATTGGATCTCTTGATCAGCCTTCATGGCTACAACTTGACACTCAAAAGTCAAGTCCACCACAGACAAGCAGAAACTCGGATTCAACCTCTTCTCAGTCACCTTCTAGTTCTAGTGCAGAAGCTCAAAGTCGCACAGGTCGAATTGTTTTCAAACTCTTTGGCAAGGATCCAAATGATTTTCCTCTTGTTCTTCGATCACAGATTCTCAGCTGGTTATCCCACAGTCCCACAGAGATTGAGAGCTATATAAGGCCAGGCTGTATTATATTAACAGTATACATCTGTCTAGAAAAATCTGCTTGGGAGGAGCTCTGCTGTAATTTAGGACTCAGCTTGAAAAAGCTTCTTGCTGCATCAAATGACCCTTTCTGGACGACAGGGTGGGTATATACAAGAGTGCAGCATTCTGTAGCCTTTCTGTACAATGGTCAGGTTGTTTTAGACGTTCCCTTGAGCCTTAGCAGCTCACAAAACCGTAGGATTTCATGTATTAAACCACTTGCTGTTTCTTCAATGGCAAGCACTCAATTTGTTGTCAAAGGTGTCAACCTTTTCCATTCTAGCACAAGGTTACTCTGTGCACTTGAAGGGAAGTATCTGGCACAGTATAGTTGTTGTGACTTGATTGATGGTGTTGATACAGCTACTGAACACGATGAGGATCAGTGCCTTAGCTTCTCTTGTACTATACCAAGTGTTACTGGGAGGGGATTTATTGAGGTGGAAGATCATGGTCTTAGCAGCTGTTCCTTTCCTTTTATTGTTGCGGAGCCAGAAATTTGTACAGAGATCTGTAATCTGGAGAGTGTGATTGAGGCAGATGAGATCTGTAAAGATGTACAGATGAGAAGCAAACAAATGGAAGAAAAGACTCGAGCCTTGGATTTCATACACGAAATAGGTTGGCTCCTTCATAGAAGTCACACGAAAGCTAGGTTGGGTCCCATGGCACCTGTCCAGGATCTGTTCCATTTCAATCGGTTCAAGTGGCTTGTTGACTTCTGCATGGACCGTCATTGGTGCTCTGTGATGAAAAAGCTTCTGGACATTATGTTTGAGGGTACTATTGATGCAGGAGAGCATACCTCTGTCGAGCTTGCGTTGTTAAACTTGGGTCTTCTACATAGAGCTGTGAGGAGAAATTGCAGGCCCATGGTTGAACTACTCTTGAAGTTCGTACCAGTTCAATCTTCAGATGACGACGGTAAGGAGAAACAAGTCGGTAAGCACTCTGACAGATTCTTATTTAAACCCGATAATGTTGGCCCTGCTGGTTTGACTCCCCTTCATGTTGCGGCAAGCATGTATGGCTCGGAGAATGTATTGGATGCATTGACTGATGACCCTGGAATGGTGGGAATCAAGGCATGGAAAAGTGCCCGGGACGGCACGGGTTTGACCCCGGAGGACTATGCATCCATGAGGGGCTACCGCTCATACATTCAACTCATCCAAACAAAAACAAGCAAGAAAGTTGATGAAACTCATCACCATGTGCTCGACATCCCATCTTCCCTTGTAGATAGCAACACAAAGAAGAAGCAACGGTCATCATCGAAAGTTTCAAGCTTTCAAACCGAGAAGATTGAAACGGGGGTGGCAGCAGCGACGATTCCACATCAGTGTGGGCTATGCCAGCACAAGCTAGCTTGTCACAGCACGAGGACAGCACTTGTTTATAGACCAGCAATGCTGTCAATGGTGGCCATTGCAGCTGTATGTGTCTGCGTGGCTCTGCTCTTCAAAAGCTCACCCCAAGTCTCCTATGTCTTCCAGCCCTTCAGATGGGAATCATTAGATTATGGCTCAATGTAG 3027 0.4486 MKAVGKKSLEWNLEDWKWDGDLFAASPLNSVPSDCRNKQSFPVDPEIPAKANTSNILSSNWDDVNPEKGKRELEKRRRAVISEGDELSDEAGCLNLNLGAQIYPIMEGDEKSGKKTKIVGSGTTSNRAVCQVEDCRADLSNAKDYHRRHKVCDVHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHPDAVVNGGSLNDERGSSYLLTSLLRILSNMHSNGSDATRDQDILSHLLRNLASVAGTINGRNIASLLEGSQGLVNAGTSGTSQKVPNLNSNGPEPIKSPGSSIKTDNGLRSQDPPKPMGQSETVPAYDMAQKCLPSGDARVGSLKSPSGSKPSNVPQSVAAETTVRRNGLNHIDLNNVYDDIQDDAENLRNSHPPEASGIGSLDQPSWLQLDTQKSSPPQTSRNSDSTSSQSPSSSSAEAQSRTGRIVFKLFGKDPNDFPLVLRSQILSWLSHSPTEIESYIRPGCIILTVYICLEKSAWEELCCNLGLSLKKLLAASNDPFWTTGWVYTRVQHSVAFLYNGQVVLDVPLSLSSSQNRRISCIKPLAVSSMASTQFVVKGVNLFHSSTRLLCALEGKYLAQYSCCDLIDGVDTATEHDEDQCLSFSCTIPSVTGRGFIEVEDHGLSSCSFPFIVAEPEICTEICNLESVIEADEICKDVQMRSKQMEEKTRALDFIHEIGWLLHRSHTKARLGPMAPVQDLFHFNRFKWLVDFCMDRHWCSVMKKLLDIMFEGTIDAGEHTSVELALLNLGLLHRAVRRNCRPMVELLLKFVPVQSSDDDGKEKQVGKHSDRFLFKPDNVGPAGLTPLHVAASMYGSENVLDALTDDPGMVGIKAWKSARDGTGLTPEDYASMRGYRSYIQLIQTKTSKKVDETHHHVLDIPSSLVDSNTKKKQRSSSKVSSFQTEKIETGVAAATIPHQCGLCQHKLACHSTRTALVYRPAMLSMVAIAAVCVCVALLFKSSPQVSYVFQPFRWESLDYGSM 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1476 1008 Pfam SBP domain 130 203 IPR004333 GO:0003677
Lele23g1476 1008 MobiDBLite consensus disorder prediction 282 328 - -
Lele23g1476 1008 MobiDBLite consensus disorder prediction 282 323 - -
Lele23g1476 1008 Coils Coil 70 90 - -
Lele23g1476 1008 MobiDBLite consensus disorder prediction 194 216 - -
Lele23g1476 1008 MobiDBLite consensus disorder prediction 907 927 - -
Lele23g1476 1008 MobiDBLite consensus disorder prediction 351 365 - -
Lele23g1476 1008 MobiDBLite consensus disorder prediction 908 927 - -
Lele23g1476 1008 MobiDBLite consensus disorder prediction 415 446 - -
Lele23g1476 1008 MobiDBLite consensus disorder prediction 48 71 - -
Lele23g1476 1008 Gene3D - 120 191 IPR036893 GO:0003677|GO:0005634
Lele23g1476 1008 Gene3D - 759 905 IPR036770 -
Lele23g1476 1008 SUPERFAMILY SBT domain 128 209 IPR036893 GO:0003677|GO:0005634
Lele23g1476 1008 ProSiteProfiles Zinc finger SBP-type profile. 127 204 IPR004333 GO:0003677
Lele23g1476 1008 FunFam Squamosa promoter-binding-like protein 14 121 191 - -
Lele23g1476 1008 SUPERFAMILY Ankyrin repeat 776 888 IPR036770 -
Lele23g1476 1008 MobiDBLite consensus disorder prediction 341 365 - -
Lele23g1476 1008 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 80 871 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1476 Lele-ChrLele23 19324578 19330318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1476 5 1007 SBP-box Gene Family AT3G60030 48.521 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele23g1476 SBP 1.2e-28 No_clan