Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1458 ATGATTGTGAGCCAGAAGATTGTGACCAAAGAAATTGTCTGTCAGCAAAGCATCCCTGTGTTGGATGTGGAGTATCATCTTCGCGTAGCACAAGAGCACAACGTCAAGGTGGTTTCGCCGAGATCTTCTGTTCCGATCTTTGGCCAAGTTCGGGTTTCTTCTGAATCAATTTCTACTGAAACGTGCCGCTTTGAAACGGCTGAGAGTTGTCCTGAGATAATTAAAGATTCCATTGTAGAGATCTCCTCATCTAAGTTCATCCCAAATGTTCGATCTGGTAGCCATGTTGATATTGGACCACGGGGATCTATGGATGATGAACACATTCAAATAGATGATCTCGCTTCCCATCTTGGACTAGTGTTCAAGTCTCCAATACCAAGTGCATTTTATGCAGTTTTTGACGGCCATGGAGGGCCCAATGCAGCCGATTTTGTCAAGAGGAATGCTATGAGACTGTTTTTTGAAGATGCTAATCTGCTGCTGTCATATGATACTGATGTATTATTTCTGAAGAAATTGGAGGATTCCCATCGGAAAGCTTTCTTACTTGCAGACGTTGCCCTGTCTAATGAAGCCACTGTTAGTAGTTCCTGCGGAACAACAGCATTGACTGCACTTATACTTGGAAATCATTTACTCATTGCGAATGCTGGCGATTGTCGGGCAGTTCTTTGCAGAAAAGGAGGGGCTGTTGACTTGTCTAAAGATCATAGACCGAGTTATTTACCAGAAAAGAGAAGGGTGGAAGAGTTAGGTGGCTTCATCGATGATGGCTATCTCAATGGTTATCTGTCTGTGACCCGAGCACTTGGGGATTGGGATTTAAAATTTCCACTTGGTTCTGCTTCACCTCTTATTGCTGATCCAGATGTTCAACAGGTTTCATTGACTGAGGATGATGAGTTTCTGATCATTGGGTGTGATGGGATTTGGGATGTGATGTCAAGTCAGGAAGCAGTTAGTTTGGTCCGCCGTGGGTTAAGAAGGCATGATGATCCACAGCAATGTGCTAGAGATCTAGTCGAGGAAGCACTGCGCTTGCATACATCAGATAATCTCACTGTGATTGTTATAAGCCTGTCCTCCGTTGCAAGCATAGTTGAATCATGTCCACCCCAAAGGCGAAGATTCAGAGCTTGCTCTCTTTCCGAAGAGGCGCGTAACAGATTGAAGAGCTTACTGGAGGGCAATTGA 1197 0.4436 MIVSQKIVTKEIVCQQSIPVLDVEYHLRVAQEHNVKVVSPRSSVPIFGQVRVSSESISTETCRFETAESCPEIIKDSIVEISSSKFIPNVRSGSHVDIGPRGSMDDEHIQIDDLASHLGLVFKSPIPSAFYAVFDGHGGPNAADFVKRNAMRLFFEDANLLLSYDTDVLFLKKLEDSHRKAFLLADVALSNEATVSSSCGTTALTALILGNHLLIANAGDCRAVLCRKGGAVDLSKDHRPSYLPEKRRVEELGGFIDDGYLNGYLSVTRALGDWDLKFPLGSASPLIADPDVQQVSLTEDDEFLIIGCDGIWDVMSSQEAVSLVRRGLRRHDDPQQCARDLVEEALRLHTSDNLTVIVISLSSVASIVESCPPQRRRFRACSLSEEARNRLKSLLEGN 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1458 398 Pfam Protein phosphatase 2C 101 353 IPR001932 -
Lele23g1458 398 SMART PP2C_SIG_2 106 361 IPR001932 -
Lele23g1458 398 SUPERFAMILY PP2C-like 82 362 IPR036457 -
Lele23g1458 398 FunFam Probable protein phosphatase 2C 22 76 364 - -
Lele23g1458 398 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Lele23g1458 398 CDD PP2Cc 90 361 IPR001932 -
Lele23g1458 398 SMART PP2C_4 81 359 IPR001932 -
Lele23g1458 398 PANTHER PROTEIN PHOSPHATASE 2C 85 360 IPR015655 GO:0004722|GO:0006470
Lele23g1458 398 ProSiteProfiles PPM-type phosphatase domain profile. 91 361 IPR001932 -
Lele23g1458 398 Gene3D - 76 366 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1458 Lele-ChrLele23 19198551 19200374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1458 7 397 PP2C-type Phosphatase Gene Family AT1G48040 56.345 1.19e-147 422