Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1445 ATGGCTGCAAATAATAGTGTGAATCTCTCTCCCTCTGAAGCCTCTAGCATCTCAGGAGGGTCCAAAGGAGAAAGTTCCAGGGATGAAGTGATCGAAAACCAGAAGATCAAGATGGTTCAAATTACCAGCAGTGATGATGATTCTCGTCGTAAATCGAAGATCAAGCTGGATTTCTTAAAATCTGAAGTGAACATAATAGGTTCTTCATCATCTAAAACAAATGTTTACAATGGAAAAGATCATGAGCACGATTATCTTGATGATCATGAGAAGAAGAACACTACTACGGAAAAGACTTTTTGTTGCAACTTCTGCAAAAGAGAGTTTTCTTCTTCACAAGCCCTGGGAGGCCATCAAAACGCACACAAACAAGAGCGTGCAATTGCAAAACGACGACAAGCAGGGATTGTTTCTGATCATCATTTTGGTTTCTTAGGGAGTCACTACTATTCTCCACACTATTCTTATTATGGTAATTACCCTACTTATCATCCTAACCCTGTGATCAATCATAATGGGCCACTTGGGGTTAGAATGGACTCCATGATTCACAAACCTTCTTATAATAACCCTAATTTTAGGTTTAGGCATGATCATCAAACCCCAGATAGGTTCGGAATTAGGGCAAGTTCTGGAACTTTGAGGATTGAAGAAATTAATGATATTAGTCCTCTAAACCGTCATCAGGTTGGGCATAATTCTTCTTCTTCAACTACTACTGCTACTGGTGATCAACTTATCAAGTTTATACCAGAAAAGGCTCCCAAAGAGGATGATGATGATCTTGATTCTTCGGGTCTTGACTTGTCTCTTAAGCTTTAA 822 0.3917 MAANNSVNLSPSEASSISGGSKGESSRDEVIENQKIKMVQITSSDDDSRRKSKIKLDFLKSEVNIIGSSSSKTNVYNGKDHEHDYLDDHEKKNTTTEKTFCCNFCKREFSSSQALGGHQNAHKQERAIAKRRQAGIVSDHHFGFLGSHYYSPHYSYYGNYPTYHPNPVINHNGPLGVRMDSMIHKPSYNNPNFRFRHDHQTPDRFGIRASSGTLRIEEINDISPLNRHQVGHNSSSSTTTATGDQLIKFIPEKAPKEDDDDLDSSGLDLSLKL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1445 273 ProSitePatterns Zinc finger C2H2 type domain signature. 101 122 IPR013087 -
Lele23g1445 273 ProSiteProfiles Zinc finger C2H2 type domain profile. 100 127 IPR013087 -
Lele23g1445 273 MobiDBLite consensus disorder prediction 226 244 - -
Lele23g1445 273 MobiDBLite consensus disorder prediction 1 46 - -
Lele23g1445 273 MobiDBLite consensus disorder prediction 225 244 - -
Lele23g1445 273 SUPERFAMILY beta-beta-alpha zinc fingers 95 127 IPR036236 -
Lele23g1445 273 MobiDBLite consensus disorder prediction 1 23 - -
Lele23g1445 273 Gene3D Classic Zinc Finger 76 142 - -
Lele23g1445 273 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 10 273 IPR044246 GO:0009788
Lele23g1445 273 MobiDBLite consensus disorder prediction 251 273 - -
Lele23g1445 273 Pfam C2H2-type zinc finger 100 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1445 Lele-ChrLele23 19088921 19090311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1445 92 273 C2H2 Transcription Factor Family AT5G01860 34.783 6.44e-17 75.9