Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1427 ATGGATGAGAAGAGAGGGGAAGAAGAAGAGAGCGGCGAGAGGTGGAAGAAGATGGCAAACTTCGTGGCATTTTCCGATGAGATTCCGACGATGAGTAGTTCTACTCTCATGAGCTTCCCTCAACCTCCTTCTTTCTCATCATCAACCATCTCCGACATGATGACGATGATGCCTCTATCCGAGAACGATTACAAGCCTAATTACTCCTCCGCCTTCATGGACTTGCTCAATCTCCAAGATTACAGTCCTTCTTTGTTCGATTGCCTCCCTTCCTCCGCCACTCACCACAACCACCACCCTCTGCCGTCGCCGGCGAGCTCCAACGTCCCTGAATCCTCCGAGGTCTTGAACACCACTCCGGCCTCCCCCAATTCTTCCTCCATCTCCTCTTCCTCCAATGAAACCCCCCTCGCCGATCATATCAACATCGACCAACCCCACACTAGTGATAAACAAGAACCCGACGATGAACAACGCAGGGACGCAGCCAAAGGAGACGACGACCTCGATCAACACAAGACTAAGAAACAGTTGAAGCCGAAGAAGAAGAACCAGAAGAAGCAAAGAGAGCCCAGATTTGCGTTCATGACAAAGAGCGAAGTCGATCAACTCGACGACGGCTATAGGTGGCGCAAGTATGGCCAAAAGGCAGTAAAAAACAGCCCATATCCCAGGAGCTATTATCGTTGCACCACCCCTGGTTGCGGCGTGAAGAAACGGGTGGAGCGGTCGTCGGAGGACCCGTCGATCGTGGTGACGACGTACGAGGGGCAACACACGCACCCGAGTCCGGTGACGAGCCGGGCGAGCCTCGTCGGGTTCGGACCCGCCACGAGGGCTAGTAGTTGTGGCGTGATTGGTTCGCCACAACAGTTTGTGGTGCCACAAGCACAGCATCAGCATCAGCATCAAGTTCAGGAACAAGATCATGTGCTGCCACAAGACGATGCTTTGTTGTATAATAATAATAGCTCACCCCTACTTCTTCCTTCGAGTATTACCGATCCGACGTCGTTTTCAAGCTTCAATCATCGTCGTTTAGGTTTTGGGCCATCGTCCACCACGGCGGCTTCTCTGTTAAGGGACAATGGGCTGCTTCAGGATATTATTCAGATGAGGAAGCAGGAGGAAGAGAAAGAGGAAGTAAAAGAAGAATAG 1158 0.519 MDEKRGEEEESGERWKKMANFVAFSDEIPTMSSSTLMSFPQPPSFSSSTISDMMTMMPLSENDYKPNYSSAFMDLLNLQDYSPSLFDCLPSSATHHNHHPLPSPASSNVPESSEVLNTTPASPNSSSISSSSNETPLADHINIDQPHTSDKQEPDDEQRRDAAKGDDDLDQHKTKKQLKPKKKNQKKQREPRFAFMTKSEVDQLDDGYRWRKYGQKAVKNSPYPRSYYRCTTPGCGVKKRVERSSEDPSIVVTTYEGQHTHPSPVTSRASLVGFGPATRASSCGVIGSPQQFVVPQAQHQHQHQVQEQDHVLPQDDALLYNNNSSPLLLPSSITDPTSFSSFNHRRLGFGPSSTTAASLLRDNGLLQDIIQMRKQEEEKEEVKEE 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1427 385 MobiDBLite consensus disorder prediction 94 139 - -
Lele23g1427 385 Coils Coil 365 385 - -
Lele23g1427 385 ProSiteProfiles WRKY domain profile. 199 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele23g1427 385 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 94 301 IPR044810 GO:0003700
Lele23g1427 385 Pfam WRKY DNA -binding domain 205 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele23g1427 385 FunFam WRKY transcription factor 57 190 264 - -
Lele23g1427 385 MobiDBLite consensus disorder prediction 94 194 - -
Lele23g1427 385 SUPERFAMILY WRKY DNA-binding domain 196 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele23g1427 385 SMART WRKY_cls 204 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele23g1427 385 Gene3D WRKY domain 188 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele23g1427 385 MobiDBLite consensus disorder prediction 144 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1427 Lele-ChrLele23 18982252 18983764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1427 122 376 WRKY Transcription Factor Family AT2G47260 42.909 1.37e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele23g1427 WRKY 2.7e-27 CL0274