Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1424 ATGAGCCATGGCACTGTGATACGTTTTGTTTCTGTTATTGATGATGACTGGAAAGTGTGGGATCTGAATGGAAGAAGTGGAGCTTTCATGTGCTCTTGTGCTCTTGTACCTTTTTCTTGTGCTCTTATCAGCAAGAATAACGGATTCATCCTTCTCCTGCCTCATCCTCTCACATCTCCCTACCTTTCCCTTTTTGTTTCTTCTGACCTCCCAGAATTTTCAGGCAAGGATTCGAGATTTTCCCCTTTCGAACCTGCGTTTTTGGGGCTTCAAATGGCGTCTTCTATCATCTCAAACCCGCTGACCAACACGGACCGCTCACGTGACCCCTCCAAGAGGAGGAAGAAGAAGAAACCTCAGCTCAAGCAACAGCTAGACGAACAGAACCATGTCCAATGGAAGTCCCCGGCTCAGCAGCAAATATACTCCTCCAAGCTCCACCAAGCCTTGGCCAGAGTCAACCTCCGCTCCTCCGCTTCTTCCACCGCCGGTGACGCTCCCCGCCGCGGTAAAGAAGTCCGCGAAGCCGCCGATAGAGTCCTTGCAGTCACTGCCAAGGGCAGGACCCGTTGGAGCCGAGCCATCCTCACCAATCGCCTCAAGCTCAAGTTCAGGAAGCACAAGAGACAGAGAGTCACGGCGCCGGCCCCCGGCACAGCCCGGTCGAAGAAGCCCAGAGTGAGCGTTCTCCGACTGAAGGGGAAGAGCTTGCCGACTGTTCAGAGGAAAGTGAGGTTTCTGGGGCGGTTGGTCCCCGGTTGCCGGAAACAACCGGTGCCGGTGATATTGGAGGAAGCCATTGATTACATATCGGCACTCGAAATGCAAGTCAGAGCCATGAGCGCGCTTGCTGACCTTCTTTCTGGGTCAACCGCTTCCGGCGTCGGCTCGAGTTCCTCGGCGCCACCCAGCTGA 915 0.5454 MSHGTVIRFVSVIDDDWKVWDLNGRSGAFMCSCALVPFSCALISKNNGFILLLPHPLTSPYLSLFVSSDLPEFSGKDSRFSPFEPAFLGLQMASSIISNPLTNTDRSRDPSKRRKKKKPQLKQQLDEQNHVQWKSPAQQQIYSSKLHQALARVNLRSSASSTAGDAPRRGKEVREAADRVLAVTAKGRTRWSRAILTNRLKLKFRKHKRQRVTAPAPGTARSKKPRVSVLRLKGKSLPTVQRKVRFLGRLVPGCRKQPVPVILEEAIDYISALEMQVRAMSALADLLSGSTASGVGSSSSAPPS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1424 304 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 135 287 IPR044660 GO:0006355
Lele23g1424 304 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 244 289 IPR036638 GO:0046983
Lele23g1424 304 MobiDBLite consensus disorder prediction 99 138 - -
Lele23g1424 304 CDD bHLH_AtIBH1_like 229 284 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1424 Lele-ChrLele23 18955560 18958111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1424 130 303 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 60.656 2.30e-54 174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0616 21 4134882 4137056 Lele23g1424 23 18955560 18958111 hybridization
Lele22g0614 22 4071249 4073180 Lele23g1424 23 18955560 18958111 hybridization