Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1419 ATGATCAACAACATACTCGCTTGCTTTAAGCCGAGGCGTCGCGGTGACGACGATGACGACGATTCCCCTATGGCCAGTGGGGAGGAGGGTACTAGTAGCGGCGGAGCCAGAGGGTACGGCGGCGGAGGCAGTGGTGGAAGAGAAGGTATGGACGGCTCAATTTGGTTCCTGGATAACGGGAAGCACGGCTGCGGTGAGTTCTCCATGGCGGTGGCTCAGGCCAACGTGGTTCTTGAAGATCAGTGCCAGCTCGTGTCTGGCCCGTTGGGCACTTTCGTCGGCATATACGATGGCCATGGAGGTCACGACGCTGCTCGATACGTTTGCGAACACTTGATTCAGAATTTACAAGTCAAAAGTAGTGTTGTGTTAATATCAGACGAGTCACAGGAAGGGGTTACAGAAAGGAGCATTGAAGGAGCGATTGGGCGAACAGAAGAGGGATTCAGCCAACTTGTGGCACAGATATGGAATAATCGAACTAGCATAGCCACCTGCGGAACTTGCTGTCTGATTGGTGTGATTTTCCAGCAGACCTTATTCGTGGCGAACCTCGGAGATTCCCGGGTTGTGATGGGCTCAAAACTCTTCGGCAGCCATGGAGATCATCTCCCACTTCAGCTATCACAGGAACACAATGCAAATAGTGAGGATGTTAGACGGCAGCTTTATGATTTGCACCCAAATGATCCCCAAGTTGTTCAAATGAAGCGTGGAACGTGGAGAGTAAAAGGTGTCATTCAGGTTTCTAGATCTATAGGAGACATGTATATGAAAGATGCGCAGTTCAACCGGGAACCCATTGCCGCAAAATTCAGACTTACGGAACCGATGGACATGCCTTACTTGAGTGCTGATCCAGAAATTATGACTCATGCACTCACAGCAAACGATTCCTTCCTTATATTTGCATCCGATGGTCTATGGGAGTTCTTGAGTAATGCCCAAGCAGTTGATCTTGTCCGAAACAATTCCCCTGCGGTAAGCTTAGCTATTCTTAATTTGATATTGTGGATTATTACTACTGGAAAGTAG 1035 0.4889 MINNILACFKPRRRGDDDDDDSPMASGEEGTSSGGARGYGGGGSGGREGMDGSIWFLDNGKHGCGEFSMAVAQANVVLEDQCQLVSGPLGTFVGIYDGHGGHDAARYVCEHLIQNLQVKSSVVLISDESQEGVTERSIEGAIGRTEEGFSQLVAQIWNNRTSIATCGTCCLIGVIFQQTLFVANLGDSRVVMGSKLFGSHGDHLPLQLSQEHNANSEDVRRQLYDLHPNDPQVVQMKRGTWRVKGVIQVSRSIGDMYMKDAQFNREPIAAKFRLTEPMDMPYLSADPEIMTHALTANDSFLIFASDGLWEFLSNAQAVDLVRNNSPAVSLAILNLILWIITTGK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1419 344 SMART PP2C_4 60 341 IPR001932 -
Lele23g1419 344 MobiDBLite consensus disorder prediction 11 45 - -
Lele23g1419 344 Pfam Protein phosphatase 2C 89 326 IPR001932 -
Lele23g1419 344 Gene3D - 56 334 IPR036457 -
Lele23g1419 344 ProSiteProfiles PPM-type phosphatase domain profile. 63 344 IPR001932 -
Lele23g1419 344 PANTHER PROTEIN PHOSPHATASE 34 326 - -
Lele23g1419 344 CDD PP2Cc 67 331 IPR001932 -
Lele23g1419 344 ProSitePatterns PPM-type phosphatase domain signature. 92 100 IPR000222 GO:0043169
Lele23g1419 344 SUPERFAMILY PP2C-like 75 324 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1419 Lele-ChrLele23 18925528 18926765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1419 54 329 PP2C-type Phosphatase Gene Family AT3G17090 59.058 7.02e-115 334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1419 23 18925528 18926765 Lele23g1419 23 18925528 18926765 ECH
Lele21g0622 21 4158561 4159753 Lele23g1419 23 18925528 18926765 hybridization