Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1407 ATGATAGTGTCCCTAATGAGCAAGCTAATTGACATAACTGTTAGTTTCCCTAGACATGTGATTAAAGGTGATAATCCAATAACGCATTGAACAAGGACGAGGCAGCAGGAAGAGGTAGCTGATAATAACAGGAAGAAGGGTTTCGTTTCGTATACCTACTTGAGAGGCCACAGAGAGAGAGAGATGGTGGAAGAAGTGGTGATAAGGGAATTCGAGGAAGAAAGGGATGTGAAAGCGGTGGGGAAGCTTGAGAGGAACTGTGAGATTGGGACTAAAGAGAGGGTCTCCATTTTTACCAACTTGCTCGCTAATCACCCTTTTTCTAGGATTGGCTTCTACCCTCTTCGTCTCATCTTGGTGGCTGAGGTGGTAGAAAGTGGTGAGATTGTAGGGGTGGTTCGAGGATGCATTAAGACAATAGGGTCTCCTTCAGGATCACTCTTCAAGATAGGTTCTATACTTGGCCTCCGGGTCTCTCCTACTTTTCGAAGAAAAGGGGTGGGACAAAAACTAGTTAACTCAGTTGAAGAATGGATGCTAAGAAATGGAGCAGAGTACTCATTCGTAGCCACAGAGAAGAACAACACTGCCTCCACTAACCTCTTCTCCCTCAAATGCCACTACCTCAACCTCACTTCTCTCCACATTTTCGTCCACCCCACTACTTTCCCTCACAAGCACATCTCCGCCGCCGACGGCAGACAGGTGAAAGTACAGAAGCTCAACATAGCCCAAGCCATCTCCTTGTACACCAGAACCTTAAAACACAAAGACCTATATCTCACAGACATGGACCTTATCTTGAAGGAGAAGCTCAGCCTCGGAACTTGGGTAACTTACTACAAAGACGATGGCAATTGGGAACTCGACAATGATAAAACTAGTAACAATGTTCCAAACTCTTGGATTGTGTTTAGCATATGGAACACATGTGAAGCGTATAAGCTTCAGGTTAGGTCAAAGTATAAACCGTTTAGGGTTTTAATTCACACGACTCTGAAGCATGCAAGAGAGAAGATCTTCCCTTGTCTGAGAATCCCTGTGAGCGACTCGCTCTCGAGGAGGAGGCCCTTCGGGTTTCTGTTCATATATGGGCTTTATGGGGAAGGAGACAACCTCGGAGAACTGATGGAACGTGCGTGGAGGTTCACGTCGAGGTTGGGAGAAAGCACGAAGGACTGTAAAGTGGTTATAACAGAGTTAGGGTTTGGTGTTCCTCTTGCGAAGCTTGTGCCTCAAACAGCTTCCATGTCTTGTATCGATGATCTGTGGTATGTTAAGAGGCTTTCAGGACAGAGCAGCGATGAGAACGAGGATGATGAAGTATTGATGAAGGGACAAGTGAGGAATGTGTTTGTTGATCCCAGGGATTTTTAG 1377 0.4575 MIVSLMSKLIDITVSFPRHVIKGDNPITHXTRTRQQEEVADNNRKKGFVSYTYLRGHREREMVEEVVIREFEEERDVKAVGKLERNCEIGTKERVSIFTNLLANHPFSRIGFYPLRLILVAEVVESGEIVGVVRGCIKTIGSPSGSLFKIGSILGLRVSPTFRRKGVGQKLVNSVEEWMLRNGAEYSFVATEKNNTASTNLFSLKCHYLNLTSLHIFVHPTTFPHKHISAADGRQVKVQKLNIAQAISLYTRTLKHKDLYLTDMDLILKEKLSLGTWVTYYKDDGNWELDNDKTSNNVPNSWIVFSIWNTCEAYKLQVRSKYKPFRVLIHTTLKHAREKIFPCLRIPVSDSLSRRRPFGFLFIYGLYGEGDNLGELMERAWRFTSRLGESTKDCKVVITELGFGVPLAKLVPQTASMSCIDDLWYVKRLSGQSSDENEDDEVLMKGQVRNVFVDPRDF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1407 458 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 66 273 IPR000182 GO:0016747
Lele23g1407 458 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 59 202 IPR016181 -
Lele23g1407 458 Gene3D - 60 252 - -
Lele23g1407 458 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 63 458 - -
Lele23g1407 458 CDD NAT_SF 118 186 - -
Lele23g1407 458 Pfam Acetyltransferase (GNAT) family 120 203 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1407 Lele-ChrLele23 18838852 18842645 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele23g1407 Acetyltransf_1 5.1e-13 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1407 23 18838852 18842645 Lele23g1407 23 18838852 18842645 ECH
Lele21g0634 21 4228312 4230648 Lele23g1407 23 18838852 18842645 hybridization
Lele22g0628 22 4166265 4168677 Lele23g1407 23 18838852 18842645 hybridization