Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1401 ATGCAAGCCCTTGCACTGCGACGAGAATACCCACTCGAGCTCTTAAAAATAACAGCAGTAGGAACAGCAGGGAATGATTCACTGGAGGAAACGGGTAAGAGATTAACCAATTTTGCAAAATCCATGAACATATCCTTCTCGTTTAATATAGTTACGGTATCCGAGATGCGTGAGCTTAAGGAAGAACTGTTCGAGCTGGACGTCGAGGAAACAATCGCAGTTTACTTTTTGTTCACACTAAGGCCCCTGATTGCAGATGCAGATCAGTTAGAAGCGATGATGAATGTGATAAGAAGTTTGAAGCCGATCGTGATGGAGGTGACGGAGGTGGAAGCGAACCACAACTCAAAGTCATTCGTGAAGAGATTTATGGAAGCTCTGTTCTACTTCAGTGCATCCTTCGACTGTGTGGAGACATGCATGGAAAGTGACGGTCCGAACAGGAGGGTGTTGGAGTCATTGTATTTGAGATATGGGATTAGGGATATTGTGGGTGCGGAGGGAGAGAAGAGGAAGATAAGGAACGTGAAGATTGAAGTGTGA 543 0.4512 MQALALRREYPLELLKITAVGTAGNDSLEETGKRLTNFAKSMNISFSFNIVTVSEMRELKEELFELDVEETIAVYFLFTLRPLIADADQLEAMMNVIRSLKPIVMEVTEVEANHNSKSFVKRFMEALFYFSASFDCVETCMESDGPNRRVLESLYLRYGIRDIVGAEGEKRKIRNVKIEV 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1401 180 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 174 IPR005202 -
Lele23g1401 180 Pfam GRAS domain family 1 177 IPR005202 -
Lele23g1401 180 ProSiteProfiles GRAS family profile. 1 180 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1401 Lele-ChrLele23 18804742 18805284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1401 1 175 GRAS Transcription Factor Family AT3G03450 37.430 7.15e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele23g1401 GRAS 8.9e-43 CL0063