Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1381 ATGATCTCTATCTGCATCTGCAATTCCAAGCTCTTATCTTGCAGTGCAACTTCCTTGTTTACCCTCCACGCTCCTCCTCCGACCACCACTCCACCACCACCTCCCGGTGACGACGACGATGAAGACCCTCCTTGCAGTTGCATTCCGGTCATCTGTATCTCGTGTGTCAATCGTCCTTCTCTGAAAACCCTAGGCGAGCCGGACTTTCACCTCTCCTGTGTTGCGGTGCAGATGGCGAAGTCGAAGAACCACACAGCTCACAACCAGTCCTACAAGGCCCACAAGAATGGTATAAAGAAGCCGAAGAGGCACCGCCATACTTCCACCAAAGGGATGGATCCCAAGTTTCTGAGGAACCAGAGGTATGCTAGGAAGCATAACAACAAGGCTGCTGAAGCGGCCACGGAGGAAGAGTAA 417 0.5252 MISICICNSKLLSCSATSLFTLHAPPPTTTPPPPPGDDDDEDPPCSCIPVICISCVNRPSLKTLGEPDFHLSCVAVQMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNNKAAEAATEEE 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1381 138 Gene3D - 78 138 - -
Lele23g1381 138 PANTHER 60S RIBOSOMAL PROTEIN L29 78 136 IPR002673 GO:0003735|GO:0005840|GO:0006412
Lele23g1381 138 MobiDBLite consensus disorder prediction 87 109 - -
Lele23g1381 138 MobiDBLite consensus disorder prediction 84 138 - -
Lele23g1381 138 Pfam Ribosomal L29e protein family 80 119 IPR002673 GO:0003735|GO:0005840|GO:0006412
Lele23g1381 138 MobiDBLite consensus disorder prediction 117 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1381 Lele-ChrLele23 18730338 18732080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1381 78 138 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 85.246 2.75e-32 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1381 23 18730338 18732080 Lele23g1381 23 18730338 18732080 ECH
Lele21g0655 21 4356618 4357154 Lele23g1381 23 18730338 18732080 hybridization
Lele22g0647 22 4275458 4276209 Lele23g1381 23 18730338 18732080 hybridization