Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1368 ATGTCTGCAGTAGTTGAAGATACAATAATAAGATCCAAGAAAGTATCATCAACGGGAAGAGCTCCTTGCTGTGACAAAGTGGGTCTCAAGAAAGGAAGATGGACTTCTGAGGAAGACAAGCTCTTAACCGACTATATTCAACAGCACGGCGAAGGCTCCTGGAGATCCTTGCCCAGAAATGCAGGGTTATTGAGGTGTGGGAAGAGTTGCAGACTGAGATGGATAAACTATTTGAAGGAAGATGTGAAGAGAGGCAACATTACTGCTCAGGAAGAGGCCATGATTGTGAAGCTTCATGGGGCGATCGGTAATAGGTGGTCTGTAATAGCGAGGCATCTACCGGGAAGAACAGATAATGAGATAAAGAATTATTGGAACTCTCATTTGAGAAGAAAAATTTACTGTTTCATGAACTCAAACTCCGACGACACTCTCCCACCTATCGACATTGCGGCTCTGAACGCAGCTGTTTCATCCAAACGAGGAAGAGGTGGTCAAGGAAGACCAACTCAAGCACCCATGCAAGAAGAGGACAAGAACAATATCACTTCAAACCAATCCTCGCACTCAGATATGAATGCTCATGATCTGTTCAACAAAATGCATCAGAGAAAAGCTAACCCCGATGAAGCTGAGGCAATTTCAATGGTGGGTTCTAGATATTGGAGCCAGAATCACCAAGAAGAGACCTCTAATGGCATTGGTTTAGATGCATATTGTGAGATGAATAATGATGATACAAATGGCAAAGCAGCATTTTGCCCCAACATGGATGGAGAAGGTGAGGCCTTGGGGCAATTTCAATGGCTAGATGATGAAGCAATGAAACTTAATTACATGTTTGAAAGTGGTATGCTTGTGAACCTAACCAGTAGTGGAAATAACAGTATGGGAAGAGAATATGGCTATGGAGTGGGGGGTGGTGGCAATAAGGAGATGAATATTCCAACAAGCGAGGATAGTAAAAGTGGGGTTTGGAGCTCTGTATCAAATTACACAGAGAGTTCATCATCAGGGAATTCTGTTTATGACTATCAGTGGGTTGATTGGGATATTTCAGCTAGTGCCCAGTCCCATAATCAATGGAACCTGCAGTACTCTGAAGAAAGCCTGATGATGGCTTGTTTGTGGGATGCCCCTGCAAATGGTGAAGTAAATAACTTCCACTGA 1170 0.4333 MSAVVEDTIIRSKKVSSTGRAPCCDKVGLKKGRWTSEEDKLLTDYIQQHGEGSWRSLPRNAGLLRCGKSCRLRWINYLKEDVKRGNITAQEEAMIVKLHGAIGNRWSVIARHLPGRTDNEIKNYWNSHLRRKIYCFMNSNSDDTLPPIDIAALNAAVSSKRGRGGQGRPTQAPMQEEDKNNITSNQSSHSDMNAHDLFNKMHQRKANPDEAEAISMVGSRYWSQNHQEETSNGIGLDAYCEMNNDDTNGKAAFCPNMDGEGEALGQFQWLDDEAMKLNYMFESGMLVNLTSSGNNSMGREYGYGVGGGGNKEMNIPTSEDSKSGVWSSVSNYTESSSSGNSVYDYQWVDWDISASAQSHNQWNLQYSEESLMMACLWDAPANGEVNNFH 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1368 389 MobiDBLite consensus disorder prediction 173 192 - -
Lele23g1368 389 SUPERFAMILY Homeodomain-like 28 125 IPR009057 -
Lele23g1368 389 MobiDBLite consensus disorder prediction 158 192 - -
Lele23g1368 389 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 133 IPR017930 -
Lele23g1368 389 CDD SANT 88 129 IPR001005 -
Lele23g1368 389 Gene3D - 28 84 - -
Lele23g1368 389 FunFam Myb transcription factor 28 84 - -
Lele23g1368 389 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 19 223 - -
Lele23g1368 389 Gene3D - 88 133 - -
Lele23g1368 389 ProSiteProfiles Myb-like domain profile. 26 78 IPR001005 -
Lele23g1368 389 CDD SANT 33 78 IPR001005 -
Lele23g1368 389 Pfam Myb-like DNA-binding domain 84 129 IPR001005 -
Lele23g1368 389 Pfam Myb-like DNA-binding domain 31 78 IPR001005 -
Lele23g1368 389 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 78 IPR017930 -
Lele23g1368 389 SMART sant 30 80 IPR001005 -
Lele23g1368 389 SMART sant 83 131 IPR001005 -
Lele23g1368 389 ProSiteProfiles Myb-like domain profile. 79 129 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1368 Lele-ChrLele23 18637197 18641376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1368 19 277 MYB Transcription Factor Family AT5G49330 45.946 1.35e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele23g1368 Myb_DNA-binding 1.1e-13 CL0123