Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1365 ATGCTTCGATTGGTGCACTTCTATTTCCGCCGATATTTGACTGCATCTAACGATCTATGGAATATAGCAATTCCTCTGCGTTTCAATTTGTTTAATTTCGGAAATCGGAAATTTTCGGTTTTGTTGTGCCACACGGTCTGGCTGTTTGATGCTTCCGAACAGTATAAGAAAATACTTGGTAATGGGCTTGTCTTCTTGATCGAGGCTATGCCTCATGTTGCCTTCAATGGTTATCTTTCTCATTTGCCTGGTTTGCAGGTTGAAAAAAATCTCCCAACCATTCAAGCCGTAGTTGCAAAGGACAGAATGTCAAAAGGAACTAGTCTGGTGCTGGATTCATCTGAAAATGGCACAGATTTATCTCAGGATGATATTGGAACCATTGAGGAAACCCCAGAAGAGTCAATTTTGTCACGACAAACTTCTGTGAACCTTGTTCCTTTTATTGGTCAAAGATTTATTTCTCAAGAAGCTGCTTATGAATTTTATTGCAGTTTTGCAAAACAATGTGGCTTTTCAATTAGACGACATCGCACTCGAGGAAAGGATGGGGTTGGTCGGGGAGTTACTAGAAGAGATTTCACTTGCCATCGTGGTGGTTATCCCCAGATTAAGCCATCTGATGATGGAAAGATGCAAAGGAATCGCAAATCTTCTCGTTGCGGCTGTCAAGCATACATGCGCATTGTCAAAAGGGCAGATTTTGATGTCCCTGAATGGCGAGTTACAGGCTTTAGTAACATCCATAATCATGAGTTATTAAAATCCAATGAGTTGCGTCTTCTTCCAGCATACTGTACAATATCTCCAGATGACAAGAGCCGTATATGCATGTTTGCTAAAGCTGGAATGTCAGTGAGGCAAATGTTAAGATTGATGGAGCTTGAGAAAGGCATCAAACTTGGTTGTTTACCTTTCACAGAAATTGACGTGAGAAACTTGTTGCAGTCATTTAGAAATGTTGATAGAGACAATGATGCTATTGATCTTATTGCTATGTGCAAGAGATTGAAAGATGAAAATCATAACTTCAAGTACGAGTTTAAGATTGATAGTAATAACAGGCTAGAGCATATTGCCTGGTCTTACGCATCATCTATTCAGTTGTATGAATCATTCGGAGATGCTGTGGTTTTTGATACAACACACCGTCTGGATGCCTATGACATGTTGTTGGGAATTTGGCTTGGAGTGGACAATCATGGAATGACTTGTTTCTTCGGTTGTGCACTTTTGCGGGATGAAAATATTCAGTCTTTTTCATGGGCTCTAAAGGCATTCTTAAGCTTCATGGAAGGAAAGGCTCCACAAACCATGTTAACTGATCATAACATGTGGCTGAAAGAGGCCATTGCTGTTGAAATGCCTGAAACCAAACATGCCTTTTGTATATGGCACATTATTGCAAAGTTCTCTGATTGGTTCTCTGTACTTCTTGGATCACATTATGATGAGTGGAAAGCCGAGTTCCATCGACTCTACAATTTGGAATTGGTGGAAGATTTTGAGGAAGGCTGGGGGCAAATGGTTGATAAATATGGACTCCATGCAAATAAACACATTGTTAGCTTATACTCATTAAGGACATTTTGGGCTTTACCATTCTTGAGGTGCTACTTCTTTGCAGGATTGACCAGCACGAGTCAATCTGAGTCCATTAATGCTTTCATCCAACGGTTCTTGGGTGCCCAATCTCAACTAGATCTCTTTGTAGAGCATGTTGCTGATATGGTTGAATTTAATGACCGGGCTGGGTCAAAGCAAAAGATGCAACGAAAACTGCAGAAAGTGTGCCTTAAAACTGGTTCACCTATTGAATCCCATGCTGCCACAATGCTTACTTCTTATGCCTTTAATAAACTGCAGGATGAGCTAGTTTTAGCACCACAATATGCATCATTTCTGGTTGATGAAGGTTGCTTTCAGGTCAGACACCACACTCAGATGGATGGAGGGTGCAAAGTATTTTGGGTTCCTTGCCAAGAACACATGAGCTGCAGCTGCCGTCTATTTGAGTTTTCAGGCATCTTATGCAGACATATATTAAGAGTCATGTCAAATAACAACTGTTTTCACATTCCTGACCAATATGTACCTGCCCGTTGGCGTAGTACTTGTTCATCTTCAGCTAACCCCTTCCGGGGTACAACTTCAAGGGATCATTCTGAAAGGATACAATTTTTGGAATCCATGGCTTCCACGCTAGTCATGGAATCCATTGAAACAGAGGAACGCCTTGGTGCTGCTTGCGAGCAAATCTCCATGGTTTTATCACGTATCAAAACCCTTCCTAGGTCAACACATGGGGTGAATGACATTGCATATAATTATCAATCGGATTCATTGATTCTGCCGGAGGTGGATGATGCTGATGGTATAATTCATGGCTTTACAATTGCAAATCCCCATGATTCTATCACTTTGGGAAAACTAAAGGAGAGAAGGGCAAGAGATGGAGTTGATATGAGTAGGAAGCGGAGACATATTTCAGGGCCGTTGTGTGGACAATATGGACATGATGCATCTGATTGCTCAACGATGGCTGGTGATAATTTGAATGGAGATACACTAGGGTACTCGTAG 2583 0.4123 MLRLVHFYFRRYLTASNDLWNIAIPLRFNLFNFGNRKFSVLLCHTVWLFDASEQYKKILGNGLVFLIEAMPHVAFNGYLSHLPGLQVEKNLPTIQAVVAKDRMSKGTSLVLDSSENGTDLSQDDIGTIEETPEESILSRQTSVNLVPFIGQRFISQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQIKPSDDGKMQRNRKSSRCGCQAYMRIVKRADFDVPEWRVTGFSNIHNHELLKSNELRLLPAYCTISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKLGCLPFTEIDVRNLLQSFRNVDRDNDAIDLIAMCKRLKDENHNFKYEFKIDSNNRLEHIAWSYASSIQLYESFGDAVVFDTTHRLDAYDMLLGIWLGVDNHGMTCFFGCALLRDENIQSFSWALKAFLSFMEGKAPQTMLTDHNMWLKEAIAVEMPETKHAFCIWHIIAKFSDWFSVLLGSHYDEWKAEFHRLYNLELVEDFEEGWGQMVDKYGLHANKHIVSLYSLRTFWALPFLRCYFFAGLTSTSQSESINAFIQRFLGAQSQLDLFVEHVADMVEFNDRAGSKQKMQRKLQKVCLKTGSPIESHAATMLTSYAFNKLQDELVLAPQYASFLVDEGCFQVRHHTQMDGGCKVFWVPCQEHMSCSCRLFEFSGILCRHILRVMSNNNCFHIPDQYVPARWRSTCSSSANPFRGTTSRDHSERIQFLESMASTLVMESIETEERLGAACEQISMVLSRIKTLPRSTHGVNDIAYNYQSDSLILPEVDDADGIIHGFTIANPHDSITLGKLKERRARDGVDMSRKRRHISGPLCGQYGHDASDCSTMAGDNLNGDTLGYS 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1365 860 SMART 26again6 664 691 IPR006564 GO:0008270
Lele23g1365 860 Pfam FAR1 DNA-binding domain 161 254 IPR004330 -
Lele23g1365 860 ProSiteProfiles Zinc finger SWIM-type profile. 656 689 IPR007527 GO:0008270
Lele23g1365 860 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 141 730 IPR031052 GO:0006355
Lele23g1365 860 Pfam MULE transposase domain 377 469 IPR018289 -
Lele23g1365 860 Pfam SWIM zinc finger 665 686 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1365 Lele-ChrLele23 18621078 18624783 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele23g1365 MULE 7.6e-21 CL0219