Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1358 ATGATTTCGGATTCCCGTTGCTGCTGCTTCTCCTTCCAAGTCGTCGTCTTGCTCATCTTCTTCGCACTGCCTTCGATTTCTCGTGCCCAGACTGCCAGCTCCTGCAACGGCATACTCGTGTCCTACGCCTATACCGGCGGGACACTGCTGCCGCCCAATGTCTCCGATCCCAAGCAGCAACCGTACCGATTCGAATCCACGATCACTGTGCTCAACAATGGACTCGACGAACTCAAGTCCTGGAAGGTTTTTGTGGGGTTCCAGCACAACGAGTTCTTAGTCTCTGCGTCTAATGCGGTGCTCGGCGACGGCACTAGCCTCCCTGCTGGCGTCGGAAACGGTACCATATTTGCTGGGTACCCCATGGCTGATCTCAAGACGGCCGTCGAGACTGCTGGGGACTTGACGCAGATGCAGGTTCAGATCGATTTGGTGGGCACGGTGTTTGGAGTAGCGCGTCCCAACGTGCCGATGCCCGCAAACATCACCCTCGCCAATGATGGATTCGTCTGTCGTAAGCCCACTGGTCAAGGTAAGAATGAGACTCGAGTCTGTTGTACAAAAGATCCCAAATTCAAGACAAACATAACCACTGATGAAGAATTCCTTCCCCGCCAGAATGGTGATCTTACAATCATGTATGATGTGATCAGAACTTACGATTCCAATTATTGGGCAGAGGTTACAATCTCAAATCATAATCCTCTTGGTCGTCTTGACAACTGGAAATTAAACTGGGACTGGATGAAGGGCGAGTTCATTTATTCAATGAAGGGGGCATATCCAACTAATGTGGATTCTTCTGATTGTATATTTGGCCCACAAGGCACCTACTATAAAGATCTCGACTTTGCCAATGTGCTGAATTGTGAAAGAAGGCCGACGATAATGGATCTCCCTCCCTCAAAGTTTAATGACACAGACCTGGGAAAGATCCCTTTTTGCTGCCGGAATGGTACAATCTTGCCACCATTGATGGACCCAAGCATGTCATCTTCAAGATTCCAAATGCAGGTCTTTAAATTGCCACCAGACCTTAATCGCTCCCAGCTTTCGCCACCGCAGAACTGGAAGATAAGCGGTACACTAAACCCTGACTACAAATGTGGCGCGCCCATCAGGGTAAGTCCTACTGAAACCCCAGATCCTTCAGGCATACCATCAAACAAATCTGCAATGGCGAGCTGGCAGATTGTGTGTAATATAACACAGGCCAAAGGGGCACCGCGTAAATGCTGTGTTTCATTTTCTGCATATTATAACGAATCTGTCATTCCTTGCAAAACATGTGCATGTGGCTGCCCCAGTATCACAGGAAAAACTTGCAGTACTTCTGCACCAGCTATGCTTCTTCCACCAGAGGCAATTCTTGTTCCTTTTGTGAATCGGACTGCTAAGGCTCTTGCTTGGGCGAGTCTGAAACATCTCTCGGTGCCTAAGCCAATGCCGTGTGGTGACAACTGTGGCGTGTCGATAAACTGGCATCTTCTTACAGACTATAGCCGAGGATGGAGTGCAAGGGTCACACTTTTCAATTGGGGAGACACTAATTTTGCTGACTGGTTTGCTGCTGTGCAAATGGATAAAGCAGCTGCAGGTTTTGAGAAGATGTATTCATTCAATGGAAGTACCTTTGATGGTGTTAGTAGTACCATATTTATGCAAGGCCTTCCAGGATTGAACTACCTTGTGGCAGAAACCGATGGGGCAAACCCCGTGAGTGATCCGAGGGTTCCCGGTAAACAACAGTCGGTGATCTCTTTTACAAAGAAAACCACCGCCGGAATCAATGTGCCGGGTGGAGATGGGTTCCCTACTAAAGTGTTCTTCAATGGGGAGGAGTGCTCTCTTCCCTCTGTGCTTCCGACCAATGGATTTAAGAAGGAATCTTCGCTAGCTACTTCAATGATCTTGACACTGTTTCTGTTGGTATTTTTGTGGCAATAG 1947 0.4828 MISDSRCCCFSFQVVVLLIFFALPSISRAQTASSCNGILVSYAYTGGTLLPPNVSDPKQQPYRFESTITVLNNGLDELKSWKVFVGFQHNEFLVSASNAVLGDGTSLPAGVGNGTIFAGYPMADLKTAVETAGDLTQMQVQIDLVGTVFGVARPNVPMPANITLANDGFVCRKPTGQGKNETRVCCTKDPKFKTNITTDEEFLPRQNGDLTIMYDVIRTYDSNYWAEVTISNHNPLGRLDNWKLNWDWMKGEFIYSMKGAYPTNVDSSDCIFGPQGTYYKDLDFANVLNCERRPTIMDLPPSKFNDTDLGKIPFCCRNGTILPPLMDPSMSSSRFQMQVFKLPPDLNRSQLSPPQNWKISGTLNPDYKCGAPIRVSPTETPDPSGIPSNKSAMASWQIVCNITQAKGAPRKCCVSFSAYYNESVIPCKTCACGCPSITGKTCSTSAPAMLLPPEAILVPFVNRTAKALAWASLKHLSVPKPMPCGDNCGVSINWHLLTDYSRGWSARVTLFNWGDTNFADWFAAVQMDKAAAGFEKMYSFNGSTFDGVSSTIFMQGLPGLNYLVAETDGANPVSDPRVPGKQQSVISFTKKTTAGINVPGGDGFPTKVFFNGEECSLPSVLPTNGFKKESSLATSMILTLFLLVFLWQ 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1358 648 Pfam COBRA-like protein 224 403 IPR006918 GO:0010215|GO:0016020
Lele23g1358 648 PANTHER COBRA-LIKE PROTEIN 7 29 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1358 Lele-ChrLele23 18593327 18595670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1358 35 633 COBRA Gene Family AT4G16120 67.608 0.0 878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1358 23 18593327 18595670 Lele23g1358 23 18593327 18595670 ECH
Lele21g0681 21 4485889 4488234 Lele23g1358 23 18593327 18595670 hybridization
Lele22g0669 22 4401167 4404338 Lele23g1358 23 18593327 18595670 hybridization