Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1339 ATGGTGTCGCTGAAGCTTCAGAAGCGGCTAGCCGCCAGTGTACTCAAGTGCGGGAAAGGAAAGGTCTGGCTTGACCCCAATGAAGTCAGCGAGATTTCCATGGCCAATTCCAGGCAAAACATCAGAAAACTGGTGAAGGATGGTTTTATAATCAGGAAGCCCACAAAGATTCACTCTAGATCTCGGGCTCGAAGAATGAAGGAGGCCAAGAGAAAGGGTCGGCATTCTGGATACGGTAAGCGTAAGGGTACTAGGGAGGCACGACTGCCAACAAAAATACTGTGGATGAGGAGAATGCGTGTGCTGAGGCGCCTGCTTCGCAAGTATCGTGAAGCTAAAAAAATTGACAAGCACATGTACCATGACATGTACATGAAGGTAAAAGGTAATGTCTTTAAGAACAAGCGTGTTTTAATGGAGAGCATCCACAAAACCAAGGCAGAAAAGGCCAGAGAAAAAACTTTGTCTGACCAATTTGAGGCCAAGCGTGCTAAGAGCAAGGCAAGCAGGGAGAGAAAGCTAGCTAGGAAAGAGGAGCGGTTGGCACAGGGACCTGTAGAGAGAGCACCTCAGGCAGCATCACAACCACAGGCTGAGGGTGCCAAGAAAACGAAGAAGTGA 621 0.4847 MVSLKLQKRLAASVLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKSKASRERKLARKEERLAQGPVERAPQAASQPQAEGAKKTKK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1339 206 PANTHER 60S RIBOSOMAL PROTEIN L19 1 187 IPR039547 GO:0003723|GO:0003735|GO:0022625
Lele23g1339 206 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Lele23g1339 206 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Lele23g1339 206 MobiDBLite consensus disorder prediction 57 79 - -
Lele23g1339 206 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
Lele23g1339 206 CDD Ribosomal_L19e_E 4 167 IPR033935 GO:0003735|GO:0022625
Lele23g1339 206 FunFam Ribosomal protein L19 1 56 - -
Lele23g1339 206 MobiDBLite consensus disorder prediction 146 184 - -
Lele23g1339 206 Hamap 50S ribosomal protein L19e [rpl19e]. 3 149 IPR000196 GO:0003735|GO:0005840|GO:0006412
Lele23g1339 206 FunFam Ribosomal protein L19 57 194 - -
Lele23g1339 206 Gene3D - 57 192 - -
Lele23g1339 206 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
Lele23g1339 206 MobiDBLite consensus disorder prediction 57 85 - -
Lele23g1339 206 MobiDBLite consensus disorder prediction 146 206 - -
Lele23g1339 206 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1339 Lele-ChrLele23 18480114 18482214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1339 1 206 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 83.654 6.78e-123 344